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REFERENCE HAIRPIN
*********************************************************************************************************
ID                 : mmu-mir-466c
DESCRIPTION        : mmu-mir-466c MI0005505 Mus musculus miR-466c stem-loop
CHROMOSOME         : 2
SPAN               : 10412966 - 10413049
LENGTH             : 84
SEQUENCE           : GTATATGTGTTGATGTGTGTGTGCATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC
OVERHANG THRESHOLD : 40%
*********************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE-3P
ID         : mmu-miR-466c-3p
ACCID      : MI0005505
PARENT     : mmu-mir-466c
CHROMOSOME : 2
START      : 10412966
STOP       : 10413049
OFFSET     : 51..73
SEQUENCE   : TATACATACACGCACACATAAGA
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE-5P
ID         : mmu-miR-466c-5p
ACCID      : MI0005505
PARENT     : mmu-mir-466c
CHROMOSOME : 2
START      : 10412966
STOP       : 10413049
OFFSET     : 12..33
SEQUENCE   : GATGTGTGTGTGCATGTACATA
STRAND     : +
******************************



*** MATURE-5P ***
____________________________________________________________________________________
GTATATGTGTTGATGTGTGTGTGCATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC REF                  2                    10412966 - 10413049  
                                                  TATACATACACGCACACATAAGA            MATURE-3P            2                    10413017 - 10413122  mmu-miR-466c-3p      +                    
           GATGTGTGTGTGCATGTACATA                                                    MATURE-5P            2                    10412978 - 10413082  mmu-miR-466c-5p      +                    
____________________________________________________________________________________

                                                                                -SEQ-                 -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........GATGTGTGTGTGCATGTACAT.....................................................       2090_3_0_0_0_0_1    MATURE-5P            4        66.67            3        60.00            1       100.00                        21   
...........GATGTGTGTGTGCATGTcCATAT...................................................      41601_1_0_0_0_0_0    MATURE-5P            1        16.67            1        20.00            0         0.00                      17C5   
...........GATGTGTGTGTGCATGTAC.......................................................       3384_1_0_0_0_0_0    MATURE-5P            1        16.67            1        20.00            0         0.00                        19   
                                                                                                                            ----------                ----------                ----------   
                                                                                                                                     6                         5                         1                                          
                                                                                                                                                         (83.33)                   (16.67)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
      MATURE-5P               5               1               6         100.00%
                     ----------      ----------      ----------                
                              5               1               6                



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