[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************************
ID : mmu-mir-466c
DESCRIPTION : mmu-mir-466c MI0005505 Mus musculus miR-466c stem-loop
CHROMOSOME : 2
SPAN : 10412966 - 10413049
LENGTH : 84
SEQUENCE : GTATATGTGTTGATGTGTGTGTGCATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC
OVERHANG THRESHOLD : 40%
*********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466c-3p
ACCID : MI0005505
PARENT : mmu-mir-466c
CHROMOSOME : 2
START : 10412966
STOP : 10413049
OFFSET : 51..73
SEQUENCE : TATACATACACGCACACATAAGA
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466c-5p
ACCID : MI0005505
PARENT : mmu-mir-466c
CHROMOSOME : 2
START : 10412966
STOP : 10413049
OFFSET : 12..33
SEQUENCE : GATGTGTGTGTGCATGTACATA
STRAND : +
******************************
*** MATURE-5P ***
____________________________________________________________________________________
GTATATGTGTTGATGTGTGTGTGCATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC REF 2 10412966 - 10413049
TATACATACACGCACACATAAGA MATURE-3P 2 10413017 - 10413122 mmu-miR-466c-3p +
GATGTGTGTGTGCATGTACATA MATURE-5P 2 10412978 - 10413082 mmu-miR-466c-5p +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........GATGTGTGTGTGCATGTACAT..................................................... 2090_3_0_0_0_0_1 MATURE-5P 4 66.67 3 60.00 1 100.00 21
...........GATGTGTGTGTGCATGTcCATAT................................................... 41601_1_0_0_0_0_0 MATURE-5P 1 16.67 1 20.00 0 0.00 17C5
...........GATGTGTGTGTGCATGTAC....................................................... 3384_1_0_0_0_0_0 MATURE-5P 1 16.67 1 20.00 0 0.00 19
---------- ---------- ----------
6 5 1
(83.33) (16.67)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 5 1 6 100.00%
---------- ---------- ----------
5 1 6
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