[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-450b
DESCRIPTION : mmu-mir-450b MI0004705 Mus musculus miR-450b stem-loop
CHROMOSOME : X
SPAN : 50401174 - 50401255
LENGTH : 82
SEQUENCE : GATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATC
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE-3P
ID : mmu-miR-450b-3p
ACCID : MI0004705
PARENT : mmu-mir-450b
CHROMOSOME : X
START : 50401174
STOP : 50401255
OFFSET : 50..71
SEQUENCE : ATTGGGAACATTTTGCATGCAT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-450b-5p
ACCID : MI0004705
PARENT : mmu-mir-450b
CHROMOSOME : X
START : 50401174
STOP : 50401255
OFFSET : 14..35
SEQUENCE : TTTTGCAGTATGTTCCTGAATA
STRAND : -
******************************
*** MATURE-3P ***
__________________________________________________________________________________
GATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATC REF X 50401174 - 50401255
ATTGGGAACATTTTGCATGCAT MATURE-3P X 50401224 - 50401326 mmu-miR-450b-3p -
TTTTGCAGTATGTTCCTGAATA MATURE-5P X 50401188 - 50401290 mmu-miR-450b-5p -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................ATTGGGAACATTTTGCAaGCAT............ 31709_1_0_0_0_0_0 MATURE-3P 1 20.00 1 25.00 0 0.00 17A4
.................................................ATTGGGAACATTTTGCAaGCATA........... 20400_0_0_0_0_0_1 MATURE-3P 1 20.00 0 0.00 1 100.00 17A5
.................................................ATTGGGAACATTTTGCATGCATA........... 24785_1_0_0_0_0_0 MATURE-3P 1 20.00 1 25.00 0 0.00 23
.................................................ATTGGGAACATTTTGCATGCATt........... 37501_1_0_0_0_0_0 MATURE-3P 1 20.00 1 25.00 0 0.00 22
.................................................ATTGGGAACATTTTGCATGCAT............ 40846_1_0_0_0_0_0 MATURE-3P 1 20.00 1 25.00 0 0.00 22
---------- ---------- ----------
5 4 1
(80.00) (20.00)
*** MATURE-5P ***
__________________________________________________________________________________
GATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATC REF X 50401174 - 50401255
ATTGGGAACATTTTGCATGCAT MATURE-3P X 50401224 - 50401326 mmu-miR-450b-3p -
TTTTGCAGTATGTTCCTGAATA MATURE-5P X 50401188 - 50401290 mmu-miR-450b-5p -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............TTTTGCAGTATGTTCCTGAATAt............................................... 35837_1_0_0_0_0_0 MATURE-5P 1 33.33 1 50.00 0 0.00 22
............TTTTTGCAGTATGTTCCTGAATAt............................................... 22998_1_0_0_0_0_0 MATURE-5P 1 33.33 1 50.00 0 0.00 23
..............TTTGCAGTATGTTCCTGAAT................................................. 41783_0_0_0_0_0_1 MATURE-5P 1 33.33 0 0.00 1 100.00 20
---------- ---------- ----------
3 2 1
(66.67) (33.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 4 1 5 62.50%
MATURE-5P 2 1 3 37.50%
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6 2 8
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