[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-450a-2
DESCRIPTION : mmu-mir-450a-2 MI0003537 Mus musculus miR-450a-2 stem-loop
CHROMOSOME : X
SPAN : 50401476 - 50401544
LENGTH : 69
SEQUENCE : GAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTC
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE-3P
ID : mmu-miR-450a-3p
ACCID : MI0003537
PARENT : mmu-mir-450a-2
CHROMOSOME : X
START : 50401476
STOP : 50401544
OFFSET : 43..64
SEQUENCE : ATTGGGGATGCTTTGCATTCAT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-450a-5p
ACCID : MI0003537
PARENT : mmu-mir-450a-2
CHROMOSOME : X
START : 50401476
STOP : 50401544
OFFSET : 8..29
SEQUENCE : TTTTGCGATGTGTTCCTAATAT
STRAND : -
******************************
*** MATURE-5P ***
_____________________________________________________________________
GAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTC REF X 50401476 - 50401544
ATTGGGGATGCTTTGCATTCAT MATURE-3P X 50401519 - 50401608 mmu-miR-450a-3p -
TTTTGCGATGTGTTCCTAATAT MATURE-5P X 50401484 - 50401573 mmu-miR-450a-5p -
_____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....TATTTTTGCGATGTGTTCCTAAT........................................... 38750_3_0_0_0_0_0 MATURE-5P 3 16.67 3 42.86 0 0.00 23
........TTTGCGATGTGTTCCaAATAT......................................... 15241_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 15A5
.......TTTTGCGATGTGTTCCTAgTAa......................................... 9563_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 18G2
........TTTGCGATGTGTTCCcAATAT......................................... 18725_1_0_0_0_0_0 MATURE-5P 1 5.56 1 14.29 0 0.00 15C5
.......TTTTGCGATGTGTTCCTAAa........................................... 38688_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 19
....TATTTTTGCGATGTGTTCCTAAa........................................... 20867_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 22
........TTTGCGATGTGTTCCTAgTAT......................................... 12795_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 17G3
.......TTTTGCGATGTGTTCCTAATAT......................................... 31034_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 22
....TATTTTTGCGATGTGTTCCTtAT........................................... 19014_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 20T2
.......TTTTGCGATGTGTTCCTAAcAT......................................... 23359_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 19C2
.......TTTTGCGATGTGTTCCTAATAc......................................... 43589_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 21
.......TTTTGCGATGTGTTCCTAATATa........................................ 28669_1_0_0_0_0_0 MATURE-5P 1 5.56 1 14.29 0 0.00 22
.......TTTTGCGATGTGTTCCTAA............................................ 23961_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 19
.....ATTTTTGCGATGTGTTCCTAATATt........................................ 4328_1_0_0_0_0_0 MATURE-5P 1 5.56 1 14.29 0 0.00 24
.......TTTTGCGATGTGTTCCTAATA.......................................... 28457_1_0_0_0_0_0 MATURE-5P 1 5.56 1 14.29 0 0.00 21
........TTTGCGATGTGTTCCTAATAT......................................... 35674_0_0_0_0_0_1 MATURE-5P 1 5.56 0 0.00 1 9.09 21
---------- ---------- ----------
18 7 11
(38.89) (61.11)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 7 11 18 100.00%
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7 11 18
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