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REFERENCE HAIRPIN
*************************************************************************************************
ID                 : mmu-mir-421
DESCRIPTION        : mmu-mir-421 MI0005496 Mus musculus miR-421 stem-loop
CHROMOSOME         : X
SPAN               : 100768260 - 100768335
LENGTH             : 76
SEQUENCE           : CATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGT
OVERHANG THRESHOLD : 40%
*************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-421
ACCID      : MI0005496
PARENT     : mmu-mir-421
CHROMOSOME : X
START      : 100768260
STOP       : 100768335
OFFSET     : 45..67
SEQUENCE   : ATCAACAGACATTAATTGGGCGC
STRAND     : -
******************************



*** MATURE ***
____________________________________________________________________________
CATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGT REF                  X                    100768260 - 100768335 
                                            ATCAACAGACATTAATTGGGCGC          MATURE               X                    100768305 - 100768402 mmu-miR-421          -                    
____________________________________________________________________________

                                                                        -SEQ-             -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
............................................ATCAACAGACATTAATTaGGCGt..........   6536_1_0_0_0_0_0       MATURE            1       100.00            1       100.00            0            0                      17A4   
                                                                                                                ----------                ----------                ----------   
                                                                                                                         1                         1                         0                                          
                                                                                                                                            (100.00)                    (0.00)                                       




*** OTHER ***
____________________________________________________________________________
CATTGTAGGCCTCATTAAATGTTTGTTGAATGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGT REF                  X                    100768260 - 100768335 
                                            ATCAACAGACATTAATTGGGCGC          MATURE               X                    100768305 - 100768402 mmu-miR-421          -                    
____________________________________________________________________________

                                                                        -SEQ-             -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.......GGCCTCATTAAATGTTTGTTGAA...............................................   8449_0_0_0_0_0_1        OTHER            1       100.00            0            0            1       100.00                        23   
                                                                                                                ----------                ----------                ----------   
                                                                                                                         1                         0                         1                                          
                                                                                                                                              (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               1               0               1          50.00%
          OTHER               0               1               1          50.00%
                     ----------      ----------      ----------                
                              1               1               2                



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