[BEGIN]

REFERENCE HAIRPIN
*****************************************************************************************
ID                 : mmu-mir-376a
DESCRIPTION        : mmu-mir-376a MI0000793 Mus musculus miR-376a stem-loop
CHROMOSOME         : 12
SPAN               : 110961991 - 110962058
LENGTH             : 68
SEQUENCE           : TAAAAGGTAGATTCTCCTTCTATGAGTACAATATTAATGACTAATCGTAGAGGAAAATCCACGTTTTC
OVERHANG THRESHOLD : 40%
*****************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-376a
ACCID      : MI0000793
PARENT     : mmu-mir-376a
CHROMOSOME : 12
START      : 110961991
STOP       : 110962058
OFFSET     : 44..64
SEQUENCE   : ATCGTAGAGGAAAATCCACGT
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-376a*
ACCID      : MI0000793
PARENT     : mmu-mir-376a
CHROMOSOME : 12
START      : 110961991
STOP       : 110962058
OFFSET     : 6..27
SEQUENCE   : GGTAGATTCTCCTTCTATGAGT
STRAND     : +
******************************



*** MATURE ***
____________________________________________________________________
TAAAAGGTAGATTCTCCTTCTATGAGTACAATATTAATGACTAATCGTAGAGGAAAATCCACGTTTTC REF                  12                   110961991 - 110962058 
                                           ATCGTAGAGGAAAATCCACGT     MATURE               12                   110962035 - 110962122 mmu-miR-376a         +                    
     GGTAGATTCTCCTTCTATGAGT                                          MATURESTAR           12                   110961997 - 110962085 mmu-miR-376a*        +                    
____________________________________________________________________

                                                                -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........................................ATCGTAGAGGAAAATCCACGT.....   12154_0_0_0_0_0_2       MATURE            2        66.67            0         0.00            2       100.00                        21   
...........................................ATCGTAGAGGAAAATCCACaTT....   31382_1_0_0_0_0_0       MATURE            1        33.33            1       100.00            0         0.00                      19A2   
                                                                                                         ----------                ----------                ----------   
                                                                                                                  3                         1                         2                                          
                                                                                                                                      (33.33)                   (66.67)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               1               2               3         100.00%
                     ----------      ----------      ----------                
                              1               2               3                



[END]
