[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-365-2
DESCRIPTION : mmu-mir-365-2 MI0001645 Mus musculus miR-365-2 stem-loop
CHROMOSOME : 11
SPAN : 79539902 - 79540013
LENGTH : 112
SEQUENCE : AGAGTGATCAAGGACAGCAAGAAAAATGAGGGACTTTCAGGGGCAGCTGTGTTTCCTGACTCAGTCATAATGCCCCTAAAAATCCTTATTGTTCTTGCAGTGTGCATCGGAG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-365
ACCID : MI0001645
PARENT : mmu-mir-365-2
CHROMOSOME : 11
START : 79539902
STOP : 79540013
OFFSET : 68..89
SEQUENCE : TAATGCCCCTAAAAATCCTTAT
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________________________________________
AGAGTGATCAAGGACAGCAAGAAAAATGAGGGACTTTCAGGGGCAGCTGTGTTTCCTGACTCAGTCATAATGCCCCTAAAAATCCTTATTGTTCTTGCAGTGTGCATCGGAG REF 11 79539902 - 79540013
TAATGCCCCTAAAAATCCTTAT MATURE 11 79539970 - 79540102 mmu-miR-365 +
________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................................TAATGCCCCTAAAAATCCTTAT........................ 37004_20_0_0_0_0_28 MATURE 48 65.75 20 60.61 28 70.00 22
..................................................................ATAATGCCCCTAAAAATCCTTAT........................ 42654_6_0_0_0_0_0 MATURE 6 8.22 6 18.18 0 0.00 23
...................................................................TAATGCCCCTAAAAATCCTaAT........................ 16359_2_0_0_0_0_1 MATURE 3 4.11 2 6.06 1 2.50 19A2
...................................................................TAATGCCCCTAAAAATCCTTAa........................ 39143_0_0_0_0_0_2 MATURE 2 2.74 0 0.00 2 5.00 21
....................................................................AATGCCCCTAAAAATCCTTAT........................ 28969_0_0_0_0_0_2 MATURE 2 2.74 0 0.00 2 5.00 21
...................................................................TAATGCCCCTAAAAATCCcTAT........................ 41275_1_0_0_0_0_1 MATURE 2 2.74 1 3.03 1 2.50 18C3
......................................................................TGCCCCTAAAAATCCTTAT........................ 16955_1_0_0_0_0_0 MATURE 1 1.37 1 3.03 0 0.00 19
....................................................................AAaGCCCCTAAAAATCCTTAT........................ 32149_1_0_0_0_0_0 MATURE 1 1.37 1 3.03 0 0.00 2A18
...................................................................TAATGCCCCTAAAAATCtTTAT........................ 1191_0_0_0_0_0_1 MATURE 1 1.37 0 0.00 1 2.50 17T4
................................................................TCgTAATGCCCCTAAAAATCCTTAT........................ 27637_0_0_0_0_0_1 MATURE 1 1.37 0 0.00 1 2.50 2G22
...................................................................TAATGCCCCTAAAAATtCTTAT........................ 43209_0_0_0_0_0_1 MATURE 1 1.37 0 0.00 1 2.50 16T5
.................................................................CAcAATGCCCCTAAAAATCCTTAT........................ 42085_1_0_0_0_0_0 MATURE 1 1.37 1 3.03 0 0.00 2C21
...................................................................TAgTGCCCCTAAAAATCCTTAT........................ 320_0_0_0_0_0_1 MATURE 1 1.37 0 0.00 1 2.50 2G19
...................................................................TAATGCCCCTAAAAATCCaTAT........................ 28886_0_0_0_0_0_1 MATURE 1 1.37 0 0.00 1 2.50 18A3
..................................................................ATAATGCCCCTAAAAATCCTTAa........................ 27495_1_0_0_0_0_0 MATURE 1 1.37 1 3.03 0 0.00 22
...................................................................TAATGCCCCTAAAAATCCTTAc........................ 17216_0_0_0_0_0_1 MATURE 1 1.37 0 0.00 1 2.50 21
---------- ---------- ----------
73 33 40
(45.21) (54.79)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 33 40 73 100.00%
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33 40 73
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