[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-34b
DESCRIPTION : mmu-mir-34b MI0000404 Mus musculus miR-34b stem-loop
CHROMOSOME : 9
SPAN : 50911667 - 50911750
LENGTH : 84
SEQUENCE : GTGCTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTGCGGTGCTGACAATCACTAACTCCACTGCCATCAAAACAAGGCAC
OVERHANG THRESHOLD : 40%
*********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-34b-3p
ACCID : MI0000404
PARENT : mmu-mir-34b
CHROMOSOME : 9
START : 50911667
STOP : 50911750
OFFSET : 51..72
SEQUENCE : AATCACTAACTCCACTGCCATC
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-34b-5p
ACCID : MI0000404
PARENT : mmu-mir-34b
CHROMOSOME : 9
START : 50911667
STOP : 50911750
OFFSET : 14..36
SEQUENCE : AGGCAGTGTAATTAGCTGATTGT
STRAND : -
******************************
*** MATURE-3P ***
____________________________________________________________________________________
GTGCTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTGCGGTGCTGACAATCACTAACTCCACTGCCATCAAAACAAGGCAC REF 9 50911667 - 50911750
AATCACTAACTCCACTGCCATC MATURE-3P 9 50911718 - 50911822 mmu-miR-34b-3p -
AGGCAGTGTAATTAGCTGATTGT MATURE-5P 9 50911681 - 50911786 mmu-miR-34b-5p -
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................ATCACTAACTCCACTGCCATCA............ 7332_2_0_0_0_0_6 MATURE-3P 8 17.78 2 11.11 6 22.22 22
..................................................AATCACTAACTCCACTGCCAcCAA........... 11904_2_0_0_0_0_0 MATURE-3P 2 4.44 2 11.11 0 0.00 20C3
..................................................AATCACTAACTCCACTGCCATCAt........... 17028_2_0_0_0_0_0 MATURE-3P 2 4.44 2 11.11 0 0.00 23
..................................................AATCACTAACTCCACTGCtATCA............ 35230_0_0_0_0_0_2 MATURE-3P 2 4.44 0 0.00 2 7.41 18T4
..................................................AATCACTAACTCCACTGCCATCA............ 13611_1_0_0_0_0_1 MATURE-3P 2 4.44 1 5.56 1 3.70 23
...................................................ATCACTAACTCCACTGCtATCt............ 37568_0_0_0_0_0_2 MATURE-3P 2 4.44 0 0.00 2 7.41 17T3
..................................................AATCACTAACTCCACTGCCATCAc........... 42143_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 23
..................................................AATCACTAACTCCACTGCCtTCAt........... 6820_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 19T3
...................................................ATCACTAACTCCACTGtCATCA............ 7836_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 16T5
..................................................AATCACTAACTCCACTGCtATCt............ 32078_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 18T3
...................................................ATCACTAACTCCACTGCgATCA............ 35620_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 17G4
..................................................AATCACTAACTCCACTGCCtTCAc........... 9365_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 19T3
...................................................ATCACTAACTCCACTGCCATCAt........... 25359_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 22
..................................................AATCACTAACTCCACTaCCATC............. 35612_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 16A5
...................................................ATCACTAACTCCACTGCCAaCA............ 11980_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 19A2
..................................................AATCACTAACTCCACTGCCATC............. 278_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 22
..................................................AATCACTAACTCCACTGCCATa............. 19941_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 21
..................................................AATCACTAACTCCACTGaCATCt............ 15585_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 17A4
...................................................ATCACTAACTCCACTGCCATCAAt.......... 37262_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 23
..................................................AATCACTAACTCCACTGCtATC............. 28439_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 18T3
..................................................AATCACTAACTCCACTcCCAT.............. 28910_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 16C4
...................................................ATCACTAACTCCACTaCCATC............. 980_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 15A5
..................................................AATCACTAACTCCACTGCCgTC............. 30159_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 19G2
...................................................ATCACTAACTCCACTGCCATCAA........... 22670_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 23
..................................................AATCACTAACTCCACTGCCATCt............ 36215_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 22
...................................................ATCACTAACTCCACTGCCA............... 4871_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 19
..................................................AATCACTAACTCCACTGCCtTC............. 8746_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 19T2
..................................................AATCACTAACTCCACTGCgATC............. 32614_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 18G3
..................................................AATCACTAACTCCACTGCtATCAt........... 7828_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 18T4
..................................................AATCACTAACTCCACTGCgATCt............ 39225_0_0_0_0_0_1 MATURE-3P 1 2.22 0 0.00 1 3.70 18G3
..................................................AATCACTAACTCCACTGCaATCt............ 27082_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 18A3
..................................................AATCACTAACTCCACTGaCATC............. 572_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 17A4
..................................................AATCACTAACTCCACTGCtATCc............ 31449_1_0_0_0_0_0 MATURE-3P 1 2.22 1 5.56 0 0.00 18T3
---------- ---------- ----------
45 18 27
(40.00) (60.00)
*** MATURE-5P ***
____________________________________________________________________________________
GTGCTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTGCGGTGCTGACAATCACTAACTCCACTGCCATCAAAACAAGGCAC REF 9 50911667 - 50911750
AATCACTAACTCCACTGCCATC MATURE-3P 9 50911718 - 50911822 mmu-miR-34b-3p -
AGGCAGTGTAATTAGCTGATTGT MATURE-5P 9 50911681 - 50911786 mmu-miR-34b-5p -
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............AGGCAGTGTAATTAGCTGATTGT................................................. 43829_50_0_0_0_0_85 MATURE-5P 135 60.54 50 56.18 85 63.43 23
.............AGGCAGTGTAATTAGCTcATTGT................................................. 35719_7_0_0_0_0_6 MATURE-5P 13 5.83 7 7.87 6 4.48 17C5
.............AGGCAGTGTAATTAGCTGATaGT................................................. 20928_5_0_0_0_0_5 MATURE-5P 10 4.48 5 5.62 5 3.73 20A2
.............AGGCAGTGTAATTAGCTGATTG.................................................. 42406_2_0_0_0_0_8 MATURE-5P 10 4.48 2 2.25 8 5.97 22
.............AGGCAGTGTAATTAGCTGATTGa................................................. 22477_5_0_0_0_0_3 MATURE-5P 8 3.59 5 5.62 3 2.24 22
.............AGGCAGTGTAATTAGCTGATTGTA................................................ 29718_3_0_0_0_0_4 MATURE-5P 7 3.14 3 3.37 4 2.99 24
.............AGGCAGTGTAATTAGCTGAaTGT................................................. 25322_2_0_0_0_0_4 MATURE-5P 6 2.69 2 2.25 4 2.99 19A3
.............AGGCAGTGTAATTAGCTGATcGT................................................. 39944_2_0_0_0_0_3 MATURE-5P 5 2.24 2 2.25 3 2.24 20C2
.............AGGCAGTGTAATTAGCTGATTGc................................................. 26982_0_0_0_0_0_4 MATURE-5P 4 1.79 0 0.00 4 2.99 22
.............AGGCAGTGTAATTAGCTGATTGTt................................................ 23036_3_0_0_0_0_0 MATURE-5P 3 1.35 3 3.37 0 0.00 23
.............AGGCAGTGTAATTAGCTGAcTGT................................................. 42607_2_0_0_0_0_1 MATURE-5P 3 1.35 2 2.25 1 0.75 19C3
.............AGGCAGTGTAATTAGCTGATgGT................................................. 4090_1_0_0_0_0_1 MATURE-5P 2 0.90 1 1.12 1 0.75 20G2
.............AGGCAGTGTAATTAGCTGATTGTAt............................................... 7426_0_0_0_0_0_2 MATURE-5P 2 0.90 0 0.00 2 1.49 24
........TTaGTAGGCAGTGTAATTAGCTGAT.................................................... 23679_1_0_0_0_0_1 MATURE-5P 2 0.90 1 1.12 1 0.75 2A22
.............AGGCAGTGTAATTAGCTGcTTGT................................................. 3126_0_0_0_0_0_2 MATURE-5P 2 0.90 0 0.00 2 1.49 18C4
...............GCAGTGTAATTAGCTGATTGT................................................. 16193_1_0_0_0_0_0 MATURE-5P 1 0.45 1 1.12 0 0.00 21
.............AGGCAGTcTAATTAGCTGATTGT................................................. 16498_0_0_0_0_0_1 MATURE-5P 1 0.45 0 0.00 1 0.75 7C15
.............AGGCAGTGTAATTAGCTGtTTGT................................................. 11999_1_0_0_0_0_0 MATURE-5P 1 0.45 1 1.12 0 0.00 18T4
...........GTAGGCAGTGTAATTAGCTGATT................................................... 42303_1_0_0_0_0_0 MATURE-5P 1 0.45 1 1.12 0 0.00 23
.............AGGCAGTGTAATTAGCgGATTG.................................................. 17427_0_0_0_0_0_1 MATURE-5P 1 0.45 0 0.00 1 0.75 16G5
...........GTAGGCAGTGTAATTAGCTcATTGT................................................. 3170_0_0_0_0_0_1 MATURE-5P 1 0.45 0 0.00 1 0.75 19C5
.............AGGCAGTGTAATTAGCTcATTGa................................................. 24774_0_0_0_0_0_1 MATURE-5P 1 0.45 0 0.00 1 0.75 17C4
.............AGGCAGTGTAATTAGCTGATT................................................... 6275_1_0_0_0_0_0 MATURE-5P 1 0.45 1 1.12 0 0.00 21
..............GGCAGTGTAATTAGCTGATTGT................................................. 33528_1_0_0_0_0_0 MATURE-5P 1 0.45 1 1.12 0 0.00 22
.............AGGCAGTGTAATTAGCTGcTTGTA................................................ 2995_1_0_0_0_0_0 MATURE-5P 1 0.45 1 1.12 0 0.00 18C5
...........GTAGGCAGTGTAATTAGCTGATTGT................................................. 2876_0_0_0_0_0_1 MATURE-5P 1 0.45 0 0.00 1 0.75 25
---------- ---------- ----------
223 89 134
(39.91) (60.09)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE-3P 18 27 45 16.79%
MATURE-5P 89 134 223 83.21%
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107 161 268
[END]