[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************************************
ID : mmu-mir-324
DESCRIPTION : mmu-mir-324 MI0000595 Mus musculus miR-324 stem-loop
CHROMOSOME : 11
SPAN : 69825545 - 69825633
LENGTH : 89
SEQUENCE : AACTGACTATGCCTCCTCGCATCCCCTAGGGCATTGGTGTAAAGCTGGAGACCCACTGCCCCAGGTGCTGCTGGGGGTTGTAGTCTGAC
OVERHANG THRESHOLD : 40%
**************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-324-3p
ACCID : MI0000595
PARENT : mmu-mir-324
CHROMOSOME : 11
START : 69825545
STOP : 69825633
OFFSET : 53..72
SEQUENCE : CCACTGCCCCAGGTGCTGCT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-324-5p
ACCID : MI0000595
PARENT : mmu-mir-324
CHROMOSOME : 11
START : 69825545
STOP : 69825633
OFFSET : 18..40
SEQUENCE : CGCATCCCCTAGGGCATTGGTGT
STRAND : +
******************************
*** MATURE-3P ***
_________________________________________________________________________________________
AACTGACTATGCCTCCTCGCATCCCCTAGGGCATTGGTGTAAAGCTGGAGACCCACTGCCCCAGGTGCTGCTGGGGGTTGTAGTCTGAC REF 11 69825545 - 69825633
CCACTGCCCCAGGTGCTGCT MATURE-3P 11 69825598 - 69825705 mmu-miR-324-3p +
CGCATCCCCTAGGGCATTGGTGT MATURE-5P 11 69825563 - 69825673 mmu-miR-324-5p +
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......................................................ACTGCCCCAGGTGCTGCTGGt............... 43785_0_0_0_0_0_7 MATURE-3P 7 43.75 0 0.00 7 53.85 20
......................................................ACTGCCCCAGGTGCTGCTGt................ 24140_1_0_0_0_0_1 MATURE-3P 2 12.50 1 33.33 1 7.69 19
......................................................ACTGCCCCAGGTGCTGCTGGtGGT............ 7474_0_0_0_0_0_1 MATURE-3P 1 6.25 0 0.00 1 7.69 20T3
.....................................................CACTGCCCCAGGTGCTGCTGa................ 26191_0_0_0_0_0_1 MATURE-3P 1 6.25 0 0.00 1 7.69 20
......................................................ACTGCCCCAGGTGCTGCTG................. 19142_1_0_0_0_0_0 MATURE-3P 1 6.25 1 33.33 0 0.00 19
......................................................ACTGCCCCAGGTGCTGCTGGa............... 22061_0_0_0_0_0_1 MATURE-3P 1 6.25 0 0.00 1 7.69 20
......................................................ACTGCCCCAGGTGCTGCTGGGa.............. 13223_0_0_0_0_0_1 MATURE-3P 1 6.25 0 0.00 1 7.69 21
......................................................ACTGCCCCAGGTGCTGCTGGc............... 2893_0_0_0_0_0_1 MATURE-3P 1 6.25 0 0.00 1 7.69 20
.....................................................CACTGCCCCAGGTGCTGCTt................. 40037_1_0_0_0_0_0 MATURE-3P 1 6.25 1 33.33 0 0.00 19
---------- ---------- ----------
16 3 13
(18.75) (81.25)
*** MATURE-5P ***
_________________________________________________________________________________________
AACTGACTATGCCTCCTCGCATCCCCTAGGGCATTGGTGTAAAGCTGGAGACCCACTGCCCCAGGTGCTGCTGGGGGTTGTAGTCTGAC REF 11 69825545 - 69825633
CCACTGCCCCAGGTGCTGCT MATURE-3P 11 69825598 - 69825705 mmu-miR-324-3p +
CGCATCCCCTAGGGCATTGGTGT MATURE-5P 11 69825563 - 69825673 mmu-miR-324-5p +
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................CGCATCCCCTAGGGCATTGGTGT.................................................. 41200_35_0_0_0_0_34 MATURE-5P 69 27.49 35 29.66 34 25.56 23
.................CGCATCCCCTAGGGCATaGGTGT.................................................. 43885_14_0_0_0_0_11 MATURE-5P 25 9.96 14 11.86 11 8.27 17A5
.................CGCATCCCCTAGGGCATTaGTGT.................................................. 25968_9_0_0_0_0_10 MATURE-5P 19 7.57 9 7.63 10 7.52 18A4
.................CGCATCCCCTAGGGCATTGaTGT.................................................. 38929_9_0_0_0_0_10 MATURE-5P 19 7.57 9 7.63 10 7.52 19A3
..................GCATCCCCTAGGGCATTGGTGT.................................................. 39710_3_0_0_0_0_8 MATURE-5P 11 4.38 3 2.54 8 6.02 22
.................CGCATCCCCTAGGGCATTGGTGTA................................................. 13950_6_0_0_0_0_3 MATURE-5P 9 3.59 6 5.08 3 2.26 24
.................CGCATCCCCTAGGGCATcGGTGT.................................................. 22954_5_0_0_0_0_4 MATURE-5P 9 3.59 5 4.24 4 3.01 17C5
.................CGCATCCCCTAGGGCATTGGTGc.................................................. 20111_2_0_0_0_0_4 MATURE-5P 6 2.39 2 1.69 4 3.01 22
.................CGCATCCCCTAGGGCATTGGT.................................................... 17872_3_0_0_0_0_2 MATURE-5P 5 1.99 3 2.54 2 1.50 21
.................CGCATCCCCTAGGGCATTGGTGa.................................................. 28253_3_0_0_0_0_2 MATURE-5P 5 1.99 3 2.54 2 1.50 22
.................CGCATCCCCTAGGGCATTtGTGT.................................................. 32464_2_0_0_0_0_2 MATURE-5P 4 1.59 2 1.69 2 1.50 18T4
.................CGCATCCCCTAGGGCATTGGaGT.................................................. 22226_1_0_0_0_0_3 MATURE-5P 4 1.59 1 0.85 3 2.26 20A2
.................CGCATCCCCTAGGGCATTGt..................................................... 41429_2_0_0_0_0_2 MATURE-5P 4 1.59 2 1.69 2 1.50 19
.................CGCATCCCCTAGGGCATTaGTGTt................................................. 41877_0_0_0_0_0_3 MATURE-5P 3 1.20 0 0.00 3 2.26 18A4
..................GCATCCCCTAGGGCATTGGaGT.................................................. 11076_0_0_0_0_0_3 MATURE-5P 3 1.20 0 0.00 3 2.26 19A2
.................CGCATCCCCTAGGGCATTGGcGT.................................................. 18510_3_0_0_0_0_0 MATURE-5P 3 1.20 3 2.54 0 0.00 20C2
.................CGCATCCCCTAGGGCATTGGTGTc................................................. 31603_0_0_0_0_0_3 MATURE-5P 3 1.20 0 0.00 3 2.26 23
..................GCATCCCCTAGGGCATTGGTGTAt................................................ 39233_1_0_0_0_0_2 MATURE-5P 3 1.20 1 0.85 2 1.50 23
..................GCATCCCCTAGGGCATaGGTGT.................................................. 24227_1_0_0_0_0_2 MATURE-5P 3 1.20 1 0.85 2 1.50 16A5
.................CGCATCCCCTAGGGCATTGGTGTt................................................. 27069_2_0_0_0_0_1 MATURE-5P 3 1.20 2 1.69 1 0.75 23
.................CGCATCCCCTAGGGCATTGGTc................................................... 16088_1_0_0_0_0_1 MATURE-5P 2 0.80 1 0.85 1 0.75 21
..................GCATCCCCTAGGGCATTGGcGT.................................................. 33414_1_0_0_0_0_1 MATURE-5P 2 0.80 1 0.85 1 0.75 19C2
.................CGCATCCCCTAGGGCATTGGTGTAt................................................ 41005_0_0_0_0_0_2 MATURE-5P 2 0.80 0 0.00 2 1.50 24
..................GCATCCCCTAGGGCATTaGTGTA................................................. 15185_2_0_0_0_0_0 MATURE-5P 2 0.80 2 1.69 0 0.00 17A5
.................CGCATCCCCTAGGGCATTGaTGa.................................................. 7960_1_0_0_0_0_1 MATURE-5P 2 0.80 1 0.85 1 0.75 19A2
.................CGCATCCCCTAGGGCATTGaTGTA................................................. 5824_1_0_0_0_0_1 MATURE-5P 2 0.80 1 0.85 1 0.75 19A4
.................CGCATCCCCTAGGGCATTcGTGT.................................................. 32454_0_0_0_0_0_2 MATURE-5P 2 0.80 0 0.00 2 1.50 18C4
.................CGCATCCCCTAGGGCATTGaTGTAt................................................ 27901_2_0_0_0_0_0 MATURE-5P 2 0.80 2 1.69 0 0.00 19A4
..................GCATCCCCTAGGGCATTGGTGc.................................................. 38567_0_0_0_0_0_2 MATURE-5P 2 0.80 0 0.00 2 1.50 21
..................GCATCCCCTAGGGCATTGaTGT.................................................. 33846_0_0_0_0_0_2 MATURE-5P 2 0.80 0 0.00 2 1.50 18A3
..................GCATCCCCTAGGGCATTaGTGT.................................................. 18699_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 17A4
...................CATCCCCTAGGGCATTGGTGTA................................................. 11486_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 22
.................CGCATCCCCTAGGGCATTGa..................................................... 5140_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 19
.................CGCATCCCCTAGGGCATTaGTG................................................... 34388_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 18A3
.................CGCATCCCCTAGGGCATTGtTGT.................................................. 37837_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 19T3
..................GCATCCCCTAGGGCATTGGTGTA................................................. 15788_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 23
.................CGCATCCCCTAGGGCATTGaTGTg................................................. 41314_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 19A3
.................CGCATCCCCTAGGGCATTGcTGT.................................................. 22972_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 19C3
..................GCATCCCCTAGGGCATTaGTGTt................................................. 2697_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 17A4
.................CGCATCCCCTAGGGCATTGGTt................................................... 6071_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 21
..................GCATCCCCTAGGGCATTGGTGTAA................................................ 33124_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 24
.................CGCATCCCCTAGGGCATTGaTGTt................................................. 41173_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 19A3
.................CGCATCCCCTAGGGCATTGGTGg.................................................. 7796_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 22
..................GCATCCCCTAGGGCATcGGTGT.................................................. 37427_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 16C5
.................CGCATCCCCTAGGGCATTcGTGTt................................................. 36903_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 18C4
.................CGCATCCCCTAGGGCATTaGTGTg................................................. 39285_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 18A4
.................CGCATCCCCTAGGGCATcGGTGa.................................................. 28235_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 17C4
.................CGCATCCCCTAGGGCATTGaTG................................................... 15036_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 19A2
..................GCATCCCCTAGGGCATTGGaGTA................................................. 37279_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 19A3
.................CGCATCCCCTAGGGCATTtGT.................................................... 17030_0_0_0_0_0_1 MATURE-5P 1 0.40 0 0.00 1 0.75 18T2
.................CGCATCCCCTAGGGCATTaGT.................................................... 15575_1_0_0_0_0_0 MATURE-5P 1 0.40 1 0.85 0 0.00 18A2
---------- ---------- ----------
251 118 133
(47.01) (52.99)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 3 13 16 5.99%
MATURE-5P 118 133 251 94.01%
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121 146 267
[END]