[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************************
ID : mmu-mir-322
DESCRIPTION : mmu-mir-322 MI0000590 Mus musculus miR-322 stem-loop
CHROMOSOME : X
SPAN : 50407432 - 50407526
LENGTH : 95
SEQUENCE : CCTCGTTGACTCCGAAGGGCTGCAGCAGCAATTCATGTTTTGGAGTATTGCCAAGGTTCAAAACATGAAGCGCTGCAACACCCCTTCGTGGGGAA
OVERHANG THRESHOLD : 40%
********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-322
ACCID : MI0000590
PARENT : mmu-mir-322
CHROMOSOME : X
START : 50407432
STOP : 50407526
OFFSET : 23..44
SEQUENCE : CAGCAGCAATTCATGTTTTGGA
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-322*
ACCID : MI0000590
PARENT : mmu-mir-322
CHROMOSOME : X
START : 50407432
STOP : 50407526
OFFSET : 61..81
SEQUENCE : AAACATGAAGCGCTGCAACAC
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________________________________
CCTCGTTGACTCCGAAGGGCTGCAGCAGCAATTCATGTTTTGGAGTATTGCCAAGGTTCAAAACATGAAGCGCTGCAACACCCCTTCGTGGGGAA REF X 50407432 - 50407526
CAGCAGCAATTCATGTTTTGGA MATURE X 50407455 - 50407570 mmu-miR-322 -
AAACATGAAGCGCTGCAACAC MATURESTAR X 50407493 - 50407607 mmu-miR-322* -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................TGCAGCAGCAATTCATGTaTTGGA.................................................... 38194_2_0_0_0_0_6 MATURE 8 10.81 2 6.25 6 14.29 18A5
.....................GCAGCAGCAATTCATGTTTaGG..................................................... 37561_2_0_0_0_0_3 MATURE 5 6.76 2 6.25 3 7.14 19A2
....................TGCAGCAGCAATTCATGTTTTGGA.................................................... 1804_3_0_0_0_0_1 MATURE 4 5.41 3 9.38 1 2.38 24
.....................GCAGCAGCAATTCATGTTTTGa..................................................... 34260_1_0_0_0_0_2 MATURE 3 4.05 1 3.12 2 4.76 21
....................TGCAGCAGCAATTCATGaTTTGG..................................................... 12615_2_0_0_0_0_1 MATURE 3 4.05 2 6.25 1 2.38 17A5
.....................GCAGCAGCAATTCATGTTTTaGA.................................................... 31481_2_0_0_0_0_1 MATURE 3 4.05 2 6.25 1 2.38 20A2
.....................GCAGCAGCAATTCATGTTTTGG..................................................... 14159_2_0_0_0_0_1 MATURE 3 4.05 2 6.25 1 2.38 22
....................TGCAGCAGCAATTCATGTTTTGt..................................................... 1774_0_0_0_0_0_2 MATURE 2 2.70 0 0.00 2 4.76 22
......................CAGCAGCAATTCATGTTTTGGA.................................................... 23415_1_0_0_0_0_1 MATURE 2 2.70 1 3.12 1 2.38 22
.....................GCAGCAGCAATTCATGTTaTGGA.................................................... 16341_2_0_0_0_0_0 MATURE 2 2.70 2 6.25 0 0.00 18A4
.....................GCAGCAGCAATTCATGTTTTGt..................................................... 9863_2_0_0_0_0_0 MATURE 2 2.70 2 6.25 0 0.00 21
.................GGCgGCAGCAGCAATTCATGTTTTG...................................................... 4845_0_0_0_0_0_2 MATURE 2 2.70 0 0.00 2 4.76 3G21
....................TGCAGCAGCAATTCATGTTcTGGA.................................................... 34952_1_0_0_0_0_1 MATURE 2 2.70 1 3.12 1 2.38 19C4
.....................GCAGCAGCAATTCATGTaTTG...................................................... 32724_1_0_0_0_0_1 MATURE 2 2.70 1 3.12 1 2.38 17A3
.....................GCAGCAGCAATTCATGTTTTG...................................................... 33812_0_0_0_0_0_2 MATURE 2 2.70 0 0.00 2 4.76 21
.....................GCAGCAGCAATTCATGTaTTGG..................................................... 24339_0_0_0_0_0_2 MATURE 2 2.70 0 0.00 2 4.76 17A4
.....................GCAGCAGCAATTCATGTTTTGGA.................................................... 21315_0_0_0_0_0_2 MATURE 2 2.70 0 0.00 2 4.76 23
....................TGCAGCAGCAATTCATGTcTTGGA.................................................... 23465_0_0_0_0_0_2 MATURE 2 2.70 0 0.00 2 4.76 18C5
.....................GCAGCAGCAATTCATGcTTTGa..................................................... 41405_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 16C4
.....................GCAGCAGCAATTCATGTTaTGt..................................................... 11392_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 18A2
......................CAGCAGCAATTCATGTTTTtGA.................................................... 4463_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 19T2
.....................GCAGCAGCAATTCATGTcTTGGt.................................................... 30109_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 17C4
......................CAGCAGCAATTCATGTTTTGGg.................................................... 31159_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 21
.....................GCAGCAGCAATTCATGTTTTcGA.................................................... 2731_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 20C2
......................CAGCAGCAATTCATGTTcTGGA.................................................... 6382_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 17C4
.....................GCAGCAGCAATTCATGTaTTGGA.................................................... 6967_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 17A5
.......................AGCAGCAATTCATGTTTTGGtGTA................................................. 10724_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 20T3
....................TGCAGCAGCAATTCATGTTaTGG..................................................... 23266_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 19A3
.......................AGCAGCAATTCATGTaTTGGA.................................................... 32367_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 15A5
....................TGCAGCAGCAATTCATGTgTTGGA.................................................... 32415_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 18G5
.....................GCAGCAGCAATTCATGTTTaGGA.................................................... 17804_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 19A3
.....................GCAGCAGCAATTCATGTTcTGG..................................................... 32351_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 18C3
.....................GCAGCAGCAATTCATGTcTTGGA.................................................... 32363_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 17C5
.....................GCAGCAGCAATTCATGTTTcGGA.................................................... 32736_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 19C3
....................TGCAGCAGCAATTCATGTTgTGGA.................................................... 27548_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 19G4
.....................GCAGCAGCAATTCATGTTTTGcAGc.................................................. 24616_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 21C2
....................TGCAGCAGCAATTCATGTTTTGG..................................................... 11934_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 23
.....................GCAGCAGCAATTCATGTTaTGG..................................................... 21191_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 18A3
.....................GCAGCAGCAATTCATGTTaTGa..................................................... 18944_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 18A2
......................CAGCAGCAATTCATGTTTaGGA.................................................... 36420_1_0_0_0_0_0 MATURE 1 1.35 1 3.12 0 0.00 18A3
.....................GCAGCAGCAATTCATGTcTTGG..................................................... 37739_0_0_0_0_0_1 MATURE 1 1.35 0 0.00 1 2.38 17C4
---------- ---------- ----------
74 32 42
(43.24) (56.76)
*** MATURESTAR ***
_______________________________________________________________________________________________
CCTCGTTGACTCCGAAGGGCTGCAGCAGCAATTCATGTTTTGGAGTATTGCCAAGGTTCAAAACATGAAGCGCTGCAACACCCCTTCGTGGGGAA REF X 50407432 - 50407526
CAGCAGCAATTCATGTTTTGGA MATURE X 50407455 - 50407570 mmu-miR-322 -
AAACATGAAGCGCTGCAACAC MATURESTAR X 50407493 - 50407607 mmu-miR-322* -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................................AAACATGAAGCGCTGCAACACt.............. 38922_6_0_0_0_0_6 MATURESTAR 12 17.65 6 17.65 6 17.65 21
............................................................AAACATGAAGCGCTGCAACAC............... 44153_6_0_0_0_0_1 MATURESTAR 7 10.29 6 17.65 1 2.94 21
..........................................................CAAAACATGAAGCGCTGCAACA................ 26813_0_0_0_0_0_5 MATURESTAR 5 7.35 0 0.00 5 14.71 22
...........................................................AAAACATGAAGCGCTGCAACA................ 34985_3_0_0_0_0_2 MATURESTAR 5 7.35 3 8.82 2 5.88 21
............................................................AAACATGAAGCGCTGCAACACC.............. 35337_1_0_0_0_0_2 MATURESTAR 3 4.41 1 2.94 2 5.88 22
............................................................AAACATGAAGCGCTGCAACACg.............. 18859_2_0_0_0_0_1 MATURESTAR 3 4.41 2 5.88 1 2.94 21
............................................................AAACATGAAGCGCTGCAACAa............... 16494_1_0_0_0_0_1 MATURESTAR 2 2.94 1 2.94 1 2.94 20
.........................................................TCAAAACATGAAGCGCTGCAACA................ 15456_1_0_0_0_0_1 MATURESTAR 2 2.94 1 2.94 1 2.94 23
..............................................................ACATGAAGCGCTGCAACAC............... 33697_2_0_0_0_0_0 MATURESTAR 2 2.94 2 5.88 0 0.00 19
............................................................AAACATGAAGCGCTGCgACACt.............. 25952_2_0_0_0_0_0 MATURESTAR 2 2.94 2 5.88 0 0.00 16G4
............................................................AAACATGAAGCGCTGCAACcCC.............. 41834_1_0_0_0_0_1 MATURESTAR 2 2.94 1 2.94 1 2.94 19C2
...........................................................AAAACATGAAGCGCTGCAACAa............... 12961_1_0_0_0_0_1 MATURESTAR 2 2.94 1 2.94 1 2.94 21
...........................................................AAAACATGAAGCGCTGCAACAC............... 17619_0_0_0_0_0_2 MATURESTAR 2 2.94 0 0.00 2 5.88 22
..........................................................CAAAACATGAAGCGCTGCAACAt............... 34481_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 22
...........................................................AAAACATGAAGCGCTcCAACA................ 30364_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 15C5
..........................................................CAAAACATGAAGCGCTcCAAC................. 21149_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 16C4
............................................................AAACATGAAGCGCTGCtACACa.............. 29846_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 16T4
............................................................AAACATGAAGCGCTGCAAgACt.............. 14972_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 18G2
..........................................................CAAAACATGAAGCGCTGCAAC................. 15506_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 21
........................................................TTCAAAACATGAAGCGCTGCAACAt............... 16132_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 24
...........................................................AAAACATGAAGCGCTGCAACAt............... 37146_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 21
............................................................AAACATGAAGCGCTGCcACAC............... 31463_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 16C4
...........................................................AAAACATGAAGCGCTGaAACA................ 40252_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 16A4
..........................................................CAAAACATGAAGCGCTGCcAC................. 42460_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 18C2
..........................................................CAAAACATGAAGCGCTGCtAC................. 17163_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 18T2
..............................................................ACATGAAGCGCTGCAACACt.............. 15180_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 19
............................................................AAACATGAAGCGCTGCAACAt............... 39450_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 20
...........................................................AAAACATGAAGCGCTGCAA.................. 34926_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 19
..........................................................CAAAACATGAAGCGCTGCAACAC............... 42296_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 23
............................................................AAACATGAAGCGCTGCtACACt.............. 34027_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 16T4
...........................................................AAAACATGAAGCGCTGaAACAC............... 41719_0_0_0_0_0_1 MATURESTAR 1 1.47 0 0.00 1 2.94 16A5
............................................................AAACATGAAGCGCTGCAcCACC.............. 40864_1_0_0_0_0_0 MATURESTAR 1 1.47 1 2.94 0 0.00 17C4
---------- ---------- ----------
68 34 34
(50.00) (50.00)
*** OTHER ***
_______________________________________________________________________________________________
CCTCGTTGACTCCGAAGGGCTGCAGCAGCAATTCATGTTTTGGAGTATTGCCAAGGTTCAAAACATGAAGCGCTGCAACACCCCTTCGTGGGGAA REF X 50407432 - 50407526
CAGCAGCAATTCATGTTTTGGA MATURE X 50407455 - 50407570 mmu-miR-322 -
AAACATGAAGCGCTGCAACAC MATURESTAR X 50407493 - 50407607 mmu-miR-322* -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................TGTTTTGGAGTATgGCCAAGGTg...................................... 3839_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 13G8
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 32 42 74 51.75%
MATURESTAR 34 34 68 47.55%
OTHER 0 1 1 0.70%
---------- ---------- ----------
66 77 143
[END]