[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************
ID : mmu-mir-320
DESCRIPTION : mmu-mir-320 MI0000704 Mus musculus miR-320 stem-loop
CHROMOSOME : 14
SPAN : 70843317 - 70843398
LENGTH : 82
SEQUENCE : GCCTCGCCGCCCTCCGCCTTCTCTTCCCGGTTCTTCCCGGAGTCGGGAAAAGCTGGGTTGAGAGGGCGAAAAAGGATGTGGG
OVERHANG THRESHOLD : 40%
*******************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-320
ACCID : MI0000704
PARENT : mmu-mir-320
CHROMOSOME : 14
START : 70843317
STOP : 70843398
OFFSET : 48..69
SEQUENCE : AAAAGCTGGGTTGAGAGGGCGA
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________________________
GCCTCGCCGCCCTCCGCCTTCTCTTCCCGGTTCTTCCCGGAGTCGGGAAAAGCTGGGTTGAGAGGGCGAAAAAGGATGTGGG REF 14 70843317 - 70843398
AAAAGCTGGGTTGAGAGGGCGA MATURE 14 70843365 - 70843467 mmu-miR-320 +
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............................................GAAAAGCTGGGTTGAGAGGGCaAAt............ 27683_6_0_0_0_0_12 MATURE 18 12.33 6 15.38 12 11.21 21A2
................................................AAAGCTGGGTTGAGAGGGCGAAt............ 34431_1_0_0_0_0_16 MATURE 17 11.64 1 2.56 16 14.95 22
...............................................AAAAGCTGGGTTGAGAGGGCaAAt............ 38299_2_0_0_0_0_6 MATURE 8 5.48 2 5.13 6 5.61 20A2
...............................................AAAAGCTGGGTTGAGAGGGCGAAA............ 8971_2_0_0_0_0_5 MATURE 7 4.79 2 5.13 5 4.67 24
..............................................GAAAAGCTGGGTTGAGAGGaCGAAA............ 3679_1_0_0_0_0_3 MATURE 4 2.74 1 2.56 3 2.80 19A5
..............................................GAAAAGCTGGGTTGAGAGGGCtAAt............ 22191_3_0_0_0_0_1 MATURE 4 2.74 3 7.69 1 0.93 21T2
...............................................AAAAGCTGGGTTGAGAGGGCGAAt............ 8619_0_0_0_0_0_4 MATURE 4 2.74 0 0.00 4 3.74 23
................................................AAAGCTGGGTTGAGAGGaCGAAt............ 40740_1_0_0_0_0_3 MATURE 4 2.74 1 2.56 3 2.80 17A4
..............................................GAAAAGCTGGGTTGAGAGGGCtAAA............ 41841_1_0_0_0_0_2 MATURE 3 2.05 1 2.56 2 1.87 21T3
................................................AAAGCTGGGTTGAGAGGcCGAAt............ 38315_0_0_0_0_0_3 MATURE 3 2.05 0 0.00 3 2.80 17C4
..............................................GAAAAGCTGGGTTGAGAGaGCGAA............. 42177_0_0_0_0_0_3 MATURE 3 2.05 0 0.00 3 2.80 18A5
................................................AAAGCTGGGTTGAGAGaGCGA.............. 35783_1_0_0_0_0_2 MATURE 3 2.05 1 2.56 2 1.87 16A4
................................................AAAGCTGGGTTGAGAGGGCGAAA............ 35925_0_0_0_0_0_3 MATURE 3 2.05 0 0.00 3 2.80 23
.............................................GGAAAAGCTGGGTTGAGAGaGCGAA............. 39802_0_0_0_0_0_3 MATURE 3 2.05 0 0.00 3 2.80 19A5
..............................................GAAAAGCTGGGTTGAGAGaGCGA.............. 10842_0_0_0_0_0_3 MATURE 3 2.05 0 0.00 3 2.80 18A4
................................................AAAGCTGGGTTGAGAGGGCGAAc............ 31010_0_0_0_0_0_3 MATURE 3 2.05 0 0.00 3 2.80 22
..............................................GAAAAGCTGGGTTGAGAGGGCaAAA............ 9281_1_0_0_0_0_2 MATURE 3 2.05 1 2.56 2 1.87 21A3
................................................AAAGCTGGGTTGAGAGGaCGAA............. 42663_0_0_0_0_0_2 MATURE 2 1.37 0 0.00 2 1.87 17A4
...............................................AAAAGCTGGGTTGAGAGGaCGAAA............ 21182_1_0_0_0_0_1 MATURE 2 1.37 1 2.56 1 0.93 18A5
...............................................AAAAGCTGGGTTGAGAGGcCGAAt............ 21094_1_0_0_0_0_1 MATURE 2 1.37 1 2.56 1 0.93 18C4
................................................AAAGCTGGGTTGAGAGtGCGA.............. 18522_2_0_0_0_0_0 MATURE 2 1.37 2 5.13 0 0.00 16T4
..............................................GAAAAGCTGGGTTGAGAGGGCaAAg............ 21307_0_0_0_0_0_2 MATURE 2 1.37 0 0.00 2 1.87 21A2
...............................................AAAAaCTGGGTTGAGAGGGCGAAA............ 12104_1_0_0_0_0_1 MATURE 2 1.37 1 2.56 1 0.93 4A19
................................................AAAGCTGGGTTGAGAGGGCaAAt............ 31582_0_0_0_0_0_2 MATURE 2 1.37 0 0.00 2 1.87 19A2
...............................................AAAAGCTGGGTTGAGAGGaCGAAt............ 32063_1_0_0_0_0_1 MATURE 2 1.37 1 2.56 1 0.93 18A4
..............................................GAAAAGCTGGGTTGAGAGaGCG............... 7397_1_0_0_0_0_1 MATURE 2 1.37 1 2.56 1 0.93 18A3
..............................................GAAAAGCTGGGTTGAGAGGaCGAt............. 11773_1_0_0_0_0_1 MATURE 2 1.37 1 2.56 1 0.93 19A3
...............................................AAAAGCTGGGTTGAGAGGGCaAAA............ 42715_0_0_0_0_0_2 MATURE 2 1.37 0 0.00 2 1.87 20A3
................................................AAAGCTGGGTTGAGAGGGCGAAg............ 24193_1_0_0_0_0_1 MATURE 2 1.37 1 2.56 1 0.93 22
...............................................AAAAGCTGGGTTGAGAaGGCGA.............. 25451_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 16A5
................................................AAAGCTGGGTTGAGAGcGCGAt............. 22842_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 16C4
................................................AAAGCTGGGTTGAGAGGaCGAAA............ 25300_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 17A5
...............................................AAAAGCTGGGTTGAGAGGcCGAAA............ 19790_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 18C5
...............................................AAAAGCTGGGTTGAGAGGGCGAAc............ 41545_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 23
...............................................AAAAGCTGGGTTGAGAGGGCaAAg............ 13215_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 20A2
..............................................GAAAAGCTGGGTTGAGAGGaCGA.............. 16686_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 19A3
................................................AAAGCTGGGTTGAGAtGGCGA.............. 43019_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 15T5
..............................................GAgAAGCTGGGTTGAGAGGGCGAAA............ 34814_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 2G22
...............................................AAAAGCTGGGTTGAGAGGcCGAt............. 24966_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 18C3
................................................AAAGCTGGGTTGAGAGGGCaAAA............ 5589_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 19A3
................................................AAAGCTGGGTTGAGAGGcCGAt............. 37949_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 17C3
..............................................GAAAAGCTGGGTTGAGAGaGCGAt............. 43271_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 18A4
................................................AAAGCTGGGTTGAGAGGtCGAAt............ 9954_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 17T4
..............................................GAAAAGCTGGGTTGAGAGGtCGAAA............ 1127_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 19T5
.................................................AAGCTGGGTTGAGAGGaCGAAA............ 24624_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 16A5
.................................................AAGCTGGGTTGAGAGGGCaAAt............ 40729_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 18A2
..............................................GAAAAGCTGGGTTGAGAGGaCGAAt............ 17282_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 19A4
................................................AAAGCTGGGTTGAGAGGtCGAt............. 4349_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 17T3
..............................................GAAAAGCTGGGTTGAGAcGGCGA.............. 32560_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 17C5
..............................................GAAAAGCTGGGTTGAGAGtGCGAA............. 7235_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 18T5
..............................................GAAAAGCTGGGTTGAGAGGtCGAt............. 43371_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 19T3
...............................................AAAAGCTGGGTTGAGAGGGCaAAc............ 35048_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 20A2
.............................................GGAAAAGCTGGGTTGAGAGGaCGAt............. 41010_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 20A3
................................................AAAGCTGGGTTGAGAGcGCGA.............. 8846_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 16C4
..............................................GAAAAGCTGGGTTGAGAGtGCGAt............. 12351_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 18T4
................................................AAAGCTGGGTTGAGAGGaCGAAc............ 37163_1_0_0_0_0_0 MATURE 1 0.68 1 2.56 0 0.00 17A4
..............................................GAAAAGCTGGGTTGAGAaGGCGA.............. 3807_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 17A5
...............................................AAAAGCTGGGTTGAGAGGaCGAt............. 27519_0_0_0_0_0_1 MATURE 1 0.68 0 0.00 1 0.93 18A3
---------- ---------- ----------
146 39 107
(26.71) (73.29)
*** OTHER ***
__________________________________________________________________________________
GCCTCGCCGCCCTCCGCCTTCTCTTCCCGGTTCTTCCCGGAGTCGGGAAAAGCTGGGTTGAGAGGGCGAAAAAGGATGTGGG REF 14 70843317 - 70843398
AAAAGCTGGGTTGAGAGGGCGA MATURE 14 70843365 - 70843467 mmu-miR-320 +
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................CGGgTCTTCCCGGAGTCGGGAAt................................. 3358_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 3G18
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 39 107 146 99.32%
OTHER 0 1 1 0.68%
---------- ---------- ----------
39 108 147
[END]