[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-32
DESCRIPTION : mmu-mir-32 MI0000691 Mus musculus miR-32 stem-loop
CHROMOSOME : 4
SPAN : 56908101 - 56908170
LENGTH : 70
SEQUENCE : GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-32
ACCID : MI0000691
PARENT : mmu-mir-32
CHROMOSOME : 4
START : 56908101
STOP : 56908170
OFFSET : 6..27
SEQUENCE : TATTGCACATTACTAAGTTGCA
STRAND : -
******************************
*** MATURE ***
______________________________________________________________________
GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC REF 4 56908101 - 56908170
TATTGCACATTACTAAGTTGCA MATURE 4 56908107 - 56908197 mmu-miR-32 -
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....TATTGCACATTACTAAGTTG.............................................. 31337_23_0_0_0_0_10 MATURE 33 27.27 23 37.10 10 16.95 20
.....TATTGCACATTACTAAGTTGC............................................. 42158_13_0_0_0_0_8 MATURE 21 17.36 13 20.97 8 13.56 21
.....TATTGCACATTACTAAGTTGCAT........................................... 38211_5_0_0_0_0_6 MATURE 11 9.09 5 8.06 6 10.17 23
......ATTGCACATTACTAAGTTGCAT........................................... 42272_0_0_0_0_0_6 MATURE 6 4.96 0 0.00 6 10.17 22
.....TATTGCACATTACTAAaTTGC............................................. 24415_4_0_0_0_0_1 MATURE 5 4.13 4 6.45 1 1.69 16A4
.....TATTGCACATTACTAAGTTGCA............................................ 42472_1_0_0_0_0_4 MATURE 5 4.13 1 1.61 4 6.78 22
.....TATTGCACATTACTAAtTTGC............................................. 8918_1_0_0_0_0_2 MATURE 3 2.48 1 1.61 2 3.39 16T4
.....TATTGCACATTACTAtGTTGC............................................. 26346_1_0_0_0_0_2 MATURE 3 2.48 1 1.61 2 3.39 15T5
.....TATTGCACATTACTAAGTTGa............................................. 41049_1_0_0_0_0_2 MATURE 3 2.48 1 1.61 2 3.39 20
.....TATTGCACATTACTAAGTcGC............................................. 30896_1_0_0_0_0_1 MATURE 2 1.65 1 1.61 1 1.69 18C2
.......TTGCACATTACTAAGTTGC............................................. 8765_1_0_0_0_0_1 MATURE 2 1.65 1 1.61 1 1.69 19
.....TATTGCACATTACTAAGTTGt............................................. 28084_1_0_0_0_0_1 MATURE 2 1.65 1 1.61 1 1.69 20
.....TATTGCACATTACTAAGTTaCA............................................ 32892_1_0_0_0_0_1 MATURE 2 1.65 1 1.61 1 1.69 19A2
.....TATTGCACATTACTAAGTTcCA............................................ 21343_2_0_0_0_0_0 MATURE 2 1.65 2 3.23 0 0.00 19C2
.....TATTGCACATTACTAAGTTGCc............................................ 33233_1_0_0_0_0_1 MATURE 2 1.65 1 1.61 1 1.69 21
.....TATTGCACATTACTAAGTTaCAT........................................... 36426_1_0_0_0_0_1 MATURE 2 1.65 1 1.61 1 1.69 19A3
.....TATTGCACATTACTAAGTTa.............................................. 1445_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 19
.....TATTGCACATTACTAAGgTGCAT........................................... 6033_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 17G5
.....TATTGCACATTACTAAGaTGCA............................................ 17813_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 17A4
.....TATTGCACATTACTAAcTTGC............................................. 274_1_0_0_0_0_0 MATURE 1 0.83 1 1.61 0 0.00 16C4
.....TATTGCACATTACTAAGaTGC............................................. 41794_1_0_0_0_0_0 MATURE 1 0.83 1 1.61 0 0.00 17A3
.......TTGCACATTACTAAGTTGCAc........................................... 29786_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 20
......ATTGCACATTACTAAGTTG.............................................. 28674_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 19
.....TATTGCACATTACTAAcTTGCA............................................ 22183_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 16C5
......ATTGCACATTACTAAGcTGCAT........................................... 3490_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 16C5
......ATTGCACATTACTAAGTTaCAT........................................... 35097_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 18A3
.....TATTGCACATTACTAcGTTGC............................................. 22702_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 15C5
.....TATTGCACATTACTAAGTTGtAT........................................... 15394_1_0_0_0_0_0 MATURE 1 0.83 1 1.61 0 0.00 20T2
.....TATTGCACATTACTAAGTTGCAa........................................... 1778_1_0_0_0_0_0 MATURE 1 0.83 1 1.61 0 0.00 22
.......TTGCACATTACTAAGcTGCAT........................................... 36001_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 15C5
.....TATTGCACATTACTAAaTTGCA............................................ 26777_1_0_0_0_0_0 MATURE 1 0.83 1 1.61 0 0.00 16A5
.....TAcTGCACATTACTAAGTTGC............................................. 28530_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 2C18
.....TATTGCACATTACTAAGcTGCAT........................................... 2358_0_0_0_0_0_1 MATURE 1 0.83 0 0.00 1 1.69 17C5
---------- ---------- ----------
121 62 59
(51.24) (48.76)
*** OTHER ***
______________________________________________________________________
GGAGATATTGCACATTACTAAGTTGCATGTTGTCACGGCCTCAATGCAATTTAGTGTGTGTGATATTTTC REF 4 56908101 - 56908170
TATTGCACATTACTAAGTTGCA MATURE 4 56908107 - 56908197 mmu-miR-32 -
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................AATaCAATTTAGTGTGTGTGATATT.... 25508_2_0_0_0_0_4 OTHER 6 54.55 2 66.67 4 50.00 3A21
...........................................ATaCAATTTAGTGTGTGTGATATTT... 21152_0_0_0_0_0_1 OTHER 1 9.09 0 0.00 1 12.50 2A22
..........................................AATaCAATTTAGTGTGTGTGATATg.... 40373_1_0_0_0_0_0 OTHER 1 9.09 1 33.33 0 0.00 3A20
...........................................ATGCAATTTAGTGTGTGTGATAT..... 36914_0_0_0_0_0_1 OTHER 1 9.09 0 0.00 1 12.50 23
.............................................GCgATTTAGTGTGTGTGATATT.... 26201_0_0_0_0_0_1 OTHER 1 9.09 0 0.00 1 12.50 2G19
..........................................AATaCAATTTAGTGTGTGTGATATc.... 28436_0_0_0_0_0_1 OTHER 1 9.09 0 0.00 1 12.50 3A20
---------- ---------- ----------
11 3 8
(27.27) (72.73)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 62 59 121 91.67%
OTHER 3 8 11 8.33%
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65 67 132
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