[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************************************
ID : mmu-mir-30b
DESCRIPTION : mmu-mir-30b MI0000145 Mus musculus miR-30b stem-loop
CHROMOSOME : 15
SPAN : 68168977 - 68169072
LENGTH : 96
SEQUENCE : CTAAGCCAAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTCATACATGCGTTGGCTGGGATGTGGATGTTTACGTCAGCTGTCTTGGAGTAT
OVERHANG THRESHOLD : 40%
*********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-30b
ACCID : MI0000145
PARENT : mmu-mir-30b
CHROMOSOME : 15
START : 68168977
STOP : 68169072
OFFSET : 21..42
SEQUENCE : TGTAAACATCCTACACTCAGCT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-30b*
ACCID : MI0000145
PARENT : mmu-mir-30b
CHROMOSOME : 15
START : 68168977
STOP : 68169072
OFFSET : 59..80
SEQUENCE : CTGGGATGTGGATGTTTACGTC
STRAND : -
******************************
*** MATURE ***
________________________________________________________________________________________________
CTAAGCCAAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTCATACATGCGTTGGCTGGGATGTGGATGTTTACGTCAGCTGTCTTGGAGTAT REF 15 68168977 - 68169072
TGTAAACATCCTACACTCAGCT MATURE 15 68168998 - 68169114 mmu-miR-30b -
CTGGGATGTGGATGTTTACGTC MATURESTAR 15 68169036 - 68169152 mmu-miR-30b* -
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................TGTAAACATCCTACACTCAGCT....................................................... 43941_1185_0_0_0_0_1072 MATURE 2257 47.16 1185 45.88 1072 48.66 22
....................TGTAAACATCCTACACaCAGCT....................................................... 37902_256_0_0_0_0_247 MATURE 503 10.51 256 9.91 247 11.21 16A5
....................TGTAAACATCCTACACTCAGCTt...................................................... 33309_140_0_0_0_0_236 MATURE 376 7.86 140 5.42 236 10.71 22
....................TGTAAACATCCTACACTCAGCTa...................................................... 41610_81_0_0_0_0_159 MATURE 240 5.01 81 3.14 159 7.22 22
.....................GTAAACATCCTACACTCAGCTt...................................................... 43545_117_0_0_0_0_17 MATURE 134 2.80 117 4.53 17 0.77 21
....................TGTAAACATCCTACACTCAGCa....................................................... 42459_57_0_0_0_0_72 MATURE 129 2.70 57 2.21 72 3.27 21
.....................GTAAACATCCTACACTCAGCTa...................................................... 42347_98_0_0_0_0_14 MATURE 112 2.34 98 3.79 14 0.64 21
....................TGTAAACATCCTACACcCAGCT....................................................... 41348_47_0_0_0_0_44 MATURE 91 1.90 47 1.82 44 2.00 16C5
....................TGTAAACATCCTACACTCAGC........................................................ 31730_59_0_0_0_0_31 MATURE 90 1.88 59 2.28 31 1.41 21
....................TGTAAACATCCTACACTCAGCc....................................................... 16460_49_0_0_0_0_31 MATURE 80 1.67 49 1.90 31 1.41 21
....................TGTAAACATCCTACAtTCAGC........................................................ 36051_43_0_0_0_0_25 MATURE 68 1.42 43 1.66 25 1.13 15T5
.....................GTAAACATCCTACACTCAGCT....................................................... 43848_37_0_0_0_0_31 MATURE 68 1.42 37 1.43 31 1.41 21
....................TGTAAACATCCTACACgCAGCT....................................................... 39146_31_0_0_0_0_29 MATURE 60 1.25 31 1.20 29 1.32 16G5
....................TGTAAACATCCTACACTCAG......................................................... 5175_30_0_0_0_0_29 MATURE 59 1.23 30 1.16 29 1.32 20
.....................GTAAACATCCTACACTCAaCTa...................................................... 43329_53_0_0_0_0_5 MATURE 58 1.21 53 2.05 5 0.23 18A2
....................TGTAAACATCCTACACTCAGCg....................................................... 35684_40_0_0_0_0_17 MATURE 57 1.19 40 1.55 17 0.77 21
.....................GTAAACATCCTACACTCAaCTt...................................................... 36026_50_0_0_0_0_6 MATURE 56 1.17 50 1.94 6 0.27 18A2
....................TGTAAACATCCTACAaTCAGC........................................................ 29875_31_0_0_0_0_15 MATURE 46 0.96 31 1.20 15 0.68 15A5
....................TGTAAACATCCTACACTCAGt........................................................ 18809_16_0_0_0_0_8 MATURE 24 0.50 16 0.62 8 0.36 20
....................TGTAAACATCCTACAgTCAGC........................................................ 36772_11_0_0_0_0_9 MATURE 20 0.42 11 0.43 9 0.41 15G5
....................TGTAAACATCCTACACTCAaCT....................................................... 32787_17_0_0_0_0_2 MATURE 19 0.40 17 0.66 2 0.09 19A2
.....................GTAAACATCCTACACTCAaCT....................................................... 43020_8_0_0_0_0_10 MATURE 18 0.38 8 0.31 10 0.45 18A2
....................TGTAAACATCCTACACTCAGCTc...................................................... 29093_4_0_0_0_0_12 MATURE 16 0.33 4 0.15 12 0.54 22
.....................GTAAACATCCTACACTCAG......................................................... 40897_2_0_0_0_0_8 MATURE 10 0.21 2 0.08 8 0.36 19
....................TGTAAACATCCTACACTCAGa........................................................ 19878_7_0_0_0_0_3 MATURE 10 0.21 7 0.27 3 0.14 20
.....................GTAAACATCCTACACaCAGCT....................................................... 42918_8_0_0_0_0_2 MATURE 10 0.21 8 0.31 2 0.09 15A5
.....................GTAAACATCCTACACTCAGCTc...................................................... 43599_6_0_0_0_0_3 MATURE 9 0.19 6 0.23 3 0.14 21
....................TGTAAACATCCTACACTCAGCTG...................................................... 43242_4_0_0_0_0_5 MATURE 9 0.19 4 0.15 5 0.23 23
...................ATGTAAACATCCTACACTCAGCTa...................................................... 41933_1_0_0_0_0_6 MATURE 7 0.15 1 0.04 6 0.27 23
.....................GTAAACATCCTACACTtAGCT....................................................... 39931_5_0_0_0_0_2 MATURE 7 0.15 5 0.19 2 0.09 16T4
...................ATGTAAACATCCTACACTCAGCT....................................................... 35901_3_0_0_0_0_3 MATURE 6 0.13 3 0.12 3 0.14 23
....................TGTAAACATCCTACACTCA.......................................................... 24843_3_0_0_0_0_3 MATURE 6 0.13 3 0.12 3 0.14 19
...................ATGTAAACATCCTACACTCAaCT....................................................... 35502_1_0_0_0_0_5 MATURE 6 0.13 1 0.04 5 0.23 20A2
.....................GTAAACATCCTACACTCAtCTt...................................................... 34823_4_0_0_0_0_1 MATURE 5 0.10 4 0.15 1 0.05 18T2
.....................GTAAACATCCTACACTCAGC........................................................ 37161_1_0_0_0_0_3 MATURE 4 0.08 1 0.04 3 0.14 20
.....................GTAAACATCCTACACTCAtCTa...................................................... 5942_4_0_0_0_0_0 MATURE 4 0.08 4 0.15 0 0.00 18T2
.....................GTAAACATCCTACACTCAGCTG...................................................... 6602_4_0_0_0_0_0 MATURE 4 0.08 4 0.15 0 0.00 22
......................TAAACATCCTACACTCAGCT....................................................... 35082_2_0_0_0_0_2 MATURE 4 0.08 2 0.08 2 0.09 20
....................TGTAAACATCCTAtACTCAGCT....................................................... 2548_1_0_0_0_0_3 MATURE 4 0.08 1 0.04 3 0.14 13T8
.....................GTAAACATCCTACACTgAGCT....................................................... 40435_3_0_0_0_0_1 MATURE 4 0.08 3 0.12 1 0.05 16G4
.....................GTAAACATCCTACACTCAcCTa...................................................... 38761_4_0_0_0_0_0 MATURE 4 0.08 4 0.15 0 0.00 18C2
.....................GTAAACATCCTACACTCAaCTc...................................................... 25052_3_0_0_0_0_0 MATURE 3 0.06 3 0.12 0 0.00 18A2
....................TGTAAACATCCTACACTCAGCTGT..................................................... 15205_3_0_0_0_0_0 MATURE 3 0.06 3 0.12 0 0.00 24
.....................GTAAACATCCTACACTCAGCa....................................................... 24606_2_0_0_0_0_1 MATURE 3 0.06 2 0.08 1 0.05 20
..................CATGTAAACATCCTACACTCAaCT....................................................... 38394_2_0_0_0_0_1 MATURE 3 0.06 2 0.08 1 0.05 21A2
.......................AAACATCCTACACTCAGCT....................................................... 35216_2_0_0_0_0_1 MATURE 3 0.06 2 0.08 1 0.05 19
.....................GTAAACATCCTACACTCAGa........................................................ 14424_0_0_0_0_0_3 MATURE 3 0.06 0 0.00 3 0.14 19
....................TGTAAACATCCTACAaTCAGCT....................................................... 21699_2_0_0_0_0_1 MATURE 3 0.06 2 0.08 1 0.05 15A6
....................TGTAgACATCCTACACTCAGCT....................................................... 14851_3_0_0_0_0_0 MATURE 3 0.06 3 0.12 0 0.00 4G17
......................TAAACATCCTACACTCAGCTt...................................................... 29628_2_0_0_0_0_0 MATURE 2 0.04 2 0.08 0 0.00 20
.....................GTAAACATCCTACACcCAGCT....................................................... 34622_0_0_0_0_0_2 MATURE 2 0.04 0 0.00 2 0.09 15C5
.....................GTAAACATCCTACACTCAaCTG...................................................... 30994_2_0_0_0_0_0 MATURE 2 0.04 2 0.08 0 0.00 18A3
....................TGTAAACATCCTgCACTCAGCT....................................................... 632_2_0_0_0_0_0 MATURE 2 0.04 2 0.08 0 0.00 12G9
.....................GTAAACATCCTACACTCAtCT....................................................... 29243_1_0_0_0_0_1 MATURE 2 0.04 1 0.04 1 0.05 18T2
.....................GTAAACATCCTACACTaAGCT....................................................... 43735_2_0_0_0_0_0 MATURE 2 0.04 2 0.08 0 0.00 16A4
....................TGTAAACATCCTACAtTCAGCT....................................................... 19347_2_0_0_0_0_0 MATURE 2 0.04 2 0.08 0 0.00 15T6
.....................GTAAACATCCTACACTCAcCTt...................................................... 4770_2_0_0_0_0_0 MATURE 2 0.04 2 0.08 0 0.00 18C2
....................TGTAAACATCCTACACTCAaCTGT..................................................... 10266_0_0_0_0_0_2 MATURE 2 0.04 0 0.00 2 0.09 19A4
...................ATGTAAACATCCTACACTCAaCTt...................................................... 1247_1_0_0_0_0_1 MATURE 2 0.04 1 0.04 1 0.05 20A2
...................ATGTAAACATCCTACACTCAGCg....................................................... 44011_2_0_0_0_0_0 MATURE 2 0.04 2 0.08 0 0.00 22
....................TGTAAACATCCTACACTCAGCaGT..................................................... 16217_1_0_0_0_0_1 MATURE 2 0.04 1 0.04 1 0.05 21A2
.....................GTAAACATtCTACACTCAGCT....................................................... 42286_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 8T12
..................CATGTAAACATCCTACAtTCAGCc....................................................... 14715_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 17T5
.....................GTAAACATCCTACACTCAGCTGT..................................................... 35029_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 23
....................TGTAAACATCCTACACTaAGCTG...................................................... 15146_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 17A5
....................TGTAAACATCCTACACTtAGCTG...................................................... 21806_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 17T5
....................TGTgAACATCCTACACTCAGCT....................................................... 23887_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 3G18
....................TGTAAACATCCTACACTCAGg........................................................ 21578_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 20
...................ATGTAAACATCCTACACTCAGCc....................................................... 36719_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 22
...................ATGTAAACATCCTACACTCAGCTt...................................................... 8509_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 23
.......................AAACATCCTACACTCAGCTt...................................................... 2262_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 19
..................CATGTAAACATCCTACACTCAGCT....................................................... 2326_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 24
....................TGcAAACATCCTACACTCAGCT....................................................... 39848_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 2C19
....................TGTAAACATCCTACACTaAGCT....................................................... 30808_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 17A4
...................ATGTAAACATCCTACACTCAGCa....................................................... 490_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 22
.....................GTAAACATCCTACACTCAaCTGc..................................................... 34143_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 18A3
...................ATGTAAACATCCTACACTgAGCT....................................................... 4342_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 18G4
....................TGTAAACATCCTACACTCAGCaGTt.................................................... 18800_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 21A2
..................CAaGTAAACATCCTACACTCAGCT....................................................... 20328_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 2A21
...................ATGTAAACATCCTACACTCAt......................................................... 42136_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 20
....................TGTAcACATCCTACACTCAGCTt...................................................... 14139_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 4C17
...................ATGTAAACATCCTACACTCAaCTa...................................................... 15835_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 20A2
....................TGTAtACATCCTACACTCAGCa....................................................... 42998_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 4T16
...................ATGTAAACATCCTACACaCAGCT....................................................... 3964_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 17A5
.....................GTAAACATCCTACACTCAGCTaTCA................................................... 38907_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 21A3
....................TGTAAACATCCTACgCTCAGCT....................................................... 17325_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 14G7
.....................GTAAACATCCTACACTCAcCT....................................................... 37627_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 18C2
....................TGTAAACAcCCTACACTCAGCT....................................................... 14611_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 8C13
...................ATGTAAACATCCTACgCTCAG......................................................... 7690_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 15G5
....................TGTAAACATCCTACACTgAGCT....................................................... 36593_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 17G4
.....................GTAAACATCCTACACTCAGt........................................................ 23318_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 19
....................TGTcAACATCCTACACTCAGCT....................................................... 35625_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 3C18
...................ATGTAAACATCCTACACcCAGCT....................................................... 23523_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 17C5
.....................GTAAACATCCTACACTtAGCTG...................................................... 29172_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 16T5
..................CATGTAAACATCCTACACTCAGCTa...................................................... 14263_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 24
....................TGTAAACATCCTACACTCAtCT....................................................... 36626_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 19T2
.....................GTAAACATCCTACACTCAaCTGT..................................................... 43565_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 18A4
....................TGTAAACATCCcACACTCAGCT....................................................... 9484_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 11C10
....................TGTAAACATCtTACACTCAGCT....................................................... 39510_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 10T11
....................TGTAAACATtCTACACTCAGCg....................................................... 4894_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 9T11
....................TGTAAACATCCTACACTCAGCcGT..................................................... 14563_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 21C2
.....................GTgAACATCCTACACTCAGCT....................................................... 22865_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 2G18
.....................GTAAACATCCTACACTCAGCc....................................................... 33448_1_0_0_0_0_0 MATURE 1 0.02 1 0.04 0 0.00 20
......................TAAACATCCTACACTCAGCg....................................................... 19251_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 19
...................ATGTAAACATCCTACACTaAGCT....................................................... 23844_0_0_0_0_0_1 MATURE 1 0.02 0 0.00 1 0.05 18A4
---------- ---------- ----------
4786 2583 2203
(53.97) (46.03)
*** MATURESTAR ***
________________________________________________________________________________________________
CTAAGCCAAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTCATACATGCGTTGGCTGGGATGTGGATGTTTACGTCAGCTGTCTTGGAGTAT REF 15 68168977 - 68169072
TGTAAACATCCTACACTCAGCT MATURE 15 68168998 - 68169114 mmu-miR-30b -
CTGGGATGTGGATGTTTACGTC MATURESTAR 15 68169036 - 68169152 mmu-miR-30b* -
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................................................GCTGGGATGTGGATGTTTACaTC................. 11920_4_0_0_0_0_2 MATURESTAR 6 15.38 4 17.39 2 12.50 20A2
.........................................................GCTGGGATGTGGATGTTTACGTC................. 23998_1_0_0_0_0_5 MATURESTAR 6 15.38 1 4.35 5 31.25 23
.........................................................GCTGGGATGTGGATGTTTACGTCt................ 38724_3_0_0_0_0_2 MATURESTAR 5 12.82 3 13.04 2 12.50 23
.........................................................GCTGGGATGTGGATGTTTACGTCAt............... 20071_4_0_0_0_0_0 MATURESTAR 4 10.26 4 17.39 0 0.00 24
.........................................................GCTGGGATGTGGATGTTTACaTCt................ 42548_1_0_0_0_0_2 MATURESTAR 3 7.69 1 4.35 2 12.50 20A2
.........................................................GCTGGGATGTGGATGTTTACGTCA................ 1391_3_0_0_0_0_0 MATURESTAR 3 7.69 3 13.04 0 0.00 24
.........................................................GCTGGGATGTGGATGTTTcCGTCt................ 22144_2_0_0_0_0_0 MATURESTAR 2 5.13 2 8.70 0 0.00 18C4
.........................................................GCTGGGATGTGGATGTTTACGaCA................ 14335_1_0_0_0_0_0 MATURESTAR 1 2.56 1 4.35 0 0.00 21A2
........................................................GGCTGGGATGTGGATGTcTACGT.................. 8061_1_0_0_0_0_0 MATURESTAR 1 2.56 1 4.35 0 0.00 17C5
.........................................................GCTGGGATGTGGATGTTTACGcCA................ 4438_0_0_0_0_0_1 MATURESTAR 1 2.56 0 0.00 1 6.25 21C2
.........................................................GCTGGGATGTGGATGTTTcCGTCA................ 40366_0_0_0_0_0_1 MATURESTAR 1 2.56 0 0.00 1 6.25 18C5
.........................................................GCTGGGATGTGGATGTTTAaGTC................. 23392_1_0_0_0_0_0 MATURESTAR 1 2.56 1 4.35 0 0.00 19A3
.........................................................GCTGGGATGTGGATGTTaACGTt................. 17782_0_0_0_0_0_1 MATURESTAR 1 2.56 0 0.00 1 6.25 17A4
.........................................................GCTGGGATGTGGATGTTaACGTC................. 40301_1_0_0_0_0_0 MATURESTAR 1 2.56 1 4.35 0 0.00 17A5
.........................................................GCTGGGATGTGGATGTTTACGTt................. 20871_1_0_0_0_0_0 MATURESTAR 1 2.56 1 4.35 0 0.00 22
.........................................................GCTGGGATGTGGATGTTaACGTa................. 9340_0_0_0_0_0_1 MATURESTAR 1 2.56 0 0.00 1 6.25 17A4
........................................................GGCTGGGATGTGGATGTTTcCGTCA................ 19002_0_0_0_0_0_1 MATURESTAR 1 2.56 0 0.00 1 6.25 19C5
---------- ---------- ----------
39 23 16
(58.97) (41.03)
*** OTHER ***
________________________________________________________________________________________________
CTAAGCCAAGTTTCAGTTCATGTAAACATCCTACACTCAGCTGTCATACATGCGTTGGCTGGGATGTGGATGTTTACGTCAGCTGTCTTGGAGTAT REF 15 68168977 - 68169072
TGTAAACATCCTACACTCAGCT MATURE 15 68168998 - 68169114 mmu-miR-30b -
CTGGGATGTGGATGTTTACGTC MATURESTAR 15 68169036 - 68169152 mmu-miR-30b* -
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
CTAAGCCAAGTTTCAGTTCA............................................................................. 9778_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 20
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2583 2203 4786 99.17%
MATURESTAR 23 16 39 0.81%
OTHER 0 1 1 0.02%
---------- ---------- ----------
2606 2220 4826
[END]