[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-301b
DESCRIPTION : mmu-mir-301b MI0004122 Mus musculus mir-301b stem-loop
CHROMOSOME : 16
SPAN : 17124493 - 17124589
LENGTH : 97
SEQUENCE : TTTCCTGCTGGCTGCGGGTGCTCTGACTAGGTTGCACTACTGTGCTGTGAGAAGCAGTGCAATGGTATTGTCAAAGCATCTGGGACCAGCCTCGAAG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-301b
ACCID : MI0004122
PARENT : mmu-mir-301b
CHROMOSOME : 16
START : 17124493
STOP : 17124589
OFFSET : 55..77
SEQUENCE : CAGTGCAATGGTATTGTCAAAGC
STRAND : -
******************************
*** MATURE ***
_________________________________________________________________________________________________
TTTCCTGCTGGCTGCGGGTGCTCTGACTAGGTTGCACTACTGTGCTGTGAGAAGCAGTGCAATGGTATTGTCAAAGCATCTGGGACCAGCCTCGAAG REF 16 17124493 - 17124589
CAGTGCAATGGTATTGTCAAAGC MATURE 16 17124548 - 17124666 mmu-miR-301b -
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................................................GCAGTGCAATGGTATTGTCAAAG...................... 36011_2_0_0_0_0_8 MATURE 10 12.99 2 6.90 8 16.67 23
......................................................CAGTGCAATGGTATTGTCAAAGCAT................... 5256_1_0_0_0_0_9 MATURE 10 12.99 1 3.45 9 18.75 25
.....................................................GCAGTGCAATGGTATTGTCAAAGC..................... 39020_4_0_0_0_0_2 MATURE 6 7.79 4 13.79 2 4.17 24
.....................................................GCAGTGCAATGGTATTGTCAAAGt..................... 36266_1_0_0_0_0_4 MATURE 5 6.49 1 3.45 4 8.33 23
......................................................CAGTGCAATGGTATTGTCAAAaCAT................... 33148_1_0_0_0_0_3 MATURE 4 5.19 1 3.45 3 6.25 21A3
.....................................................GCAGTGCAATGGTATTGTCAAA....................... 14909_3_0_0_0_0_0 MATURE 3 3.90 3 10.34 0 0.00 22
......................................................CAGTGCAATGGTATTGTCAgAGCAT................... 41589_1_0_0_0_0_2 MATURE 3 3.90 1 3.45 2 4.17 19G5
.....................................................GCAGTGCAATGGTATTaTCAAA....................... 41878_2_0_0_0_0_1 MATURE 3 3.90 2 6.90 1 2.08 16A5
......................................................CAGTGCAATGGTATTGTCAtAGCAT................... 14748_1_0_0_0_0_2 MATURE 3 3.90 1 3.45 2 4.17 19T5
.....................................................GCAGTGCAATGGTATTGaCAAA....................... 38722_1_0_0_0_0_1 MATURE 2 2.60 1 3.45 1 2.08 17A4
.....................................................GCAGTGCAATGGTATTGTCAAAGa..................... 43698_1_0_0_0_0_1 MATURE 2 2.60 1 3.45 1 2.08 23
.......................................................AGTGCAATGGTATTGTCAAAGCATt.................. 1293_1_0_0_0_0_1 MATURE 2 2.60 1 3.45 1 2.08 24
......................................................CAGTGCAATGGTATTGTCAAA....................... 37602_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 21
.....................................................GCAGTGCAATGGTATTGTtAAAGC..................... 36280_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 18T5
.....................................................GCAGTGCAATGGTATTGTtAAAGt..................... 32268_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 18T4
.....................................................GCAGTGCAATGGTATTGTCA......................... 40070_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 20
......................................................CAGTGCAATGGTATTGTCAAcGCAT................... 4398_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 20C4
.......................................................AGTGCAATGGTATTGTCAAAGCAT................... 16914_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 24
.....................................................GCAGTGCAATGGTATTGTCAAtGC..................... 30765_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 21T2
....................................................AGCAGTGCAATGGTATTGTCAgAG...................... 2177_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 21G2
.....................................................GCAGTGCAATGGTATTGaCAAAG...................... 18466_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 17A5
.........................................................TGCAATGGTATTGTCAAAcCAT................... 13357_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 18C3
.....................................................GCAGTGCAATGGTATTGTCAAg....................... 6370_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 21
......................................................CAGTGCAATGGTATTGTCAAAGC..................... 25536_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 23
.....................................................GCAGTGCAATGGTATTGTCAAt....................... 22271_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 21
.....................................................GCAGTGCAATGGTATTGTCAcAGt..................... 38607_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 20C2
.......................................................AGTGCAATGGTATTGTCAAAGCATa.................. 34767_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 24
......................................................CAGTGCAATGGTATTGTCtAAGC..................... 9035_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 18T4
.....................................................GCAGTGCAATGGTATTGTCAtAGC..................... 1174_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 20T3
.......................................................AGTGCAATGGTATTGTCAAAaCATt.................. 17614_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 20A3
.....................................................GCAGTGCAATGGTATTGTCAA........................ 28561_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 21
......................................................CAGTGCAATGGTATTGTCAAAGt..................... 457_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 22
.......................................................AGTGCAATGGTATTGTCAAtGCAT................... 5565_1_0_0_0_0_0 MATURE 1 1.30 1 3.45 0 0.00 19T4
.....................................................GCAGTGCAATGGTATTGTCAAAGCA.................... 18097_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 25
.....................................................GCAGTGCAATGGTATTGTaAAAG...................... 28783_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 18A4
.......................................................AGTGCAATGGTATTGTCAAAGCA.................... 28100_0_0_0_0_0_1 MATURE 1 1.30 0 0.00 1 2.08 23
---------- ---------- ----------
77 29 48
(37.66) (62.34)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 29 48 77 100.00%
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29 48 77
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