[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************
ID : mmu-mir-298
DESCRIPTION : mmu-mir-298 MI0000398 Mus musculus miR-298 stem-loop
CHROMOSOME : 2
SPAN : 174093005 - 174093086
LENGTH : 82
SEQUENCE : CCAGGCCTTTGGCAGAGGAGGGCTGTTCTTCCCTTGAGTTTTATGACTGGGAGGAACTAGCCTTCTCTCAGCTTAGGAGTGG
OVERHANG THRESHOLD : 40%
*******************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-298
ACCID : MI0000398
PARENT : mmu-mir-298
CHROMOSOME : 2
START : 174093005
STOP : 174093086
OFFSET : 11..33
SEQUENCE : GGCAGAGGAGGGCTGTTCTTCCC
STRAND : -
******************************
*** MATURE ***
__________________________________________________________________________________
CCAGGCCTTTGGCAGAGGAGGGCTGTTCTTCCCTTGAGTTTTATGACTGGGAGGAACTAGCCTTCTCTCAGCTTAGGAGTGG REF 2 174093005 - 174093086
GGCAGAGGAGGGCTGTTCTTCCC MATURE 2 174093016 - 174093119 mmu-miR-298 -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........GGCAGAGGAGGGCTGTTCTTCCCT................................................. 41422_0_0_0_0_0_2 MATURE 2 28.57 0 0.00 2 33.33 24
..........GGCAGAGGAGGGCTGTTCTaCCCTT................................................ 16039_0_0_0_0_0_1 MATURE 1 14.29 0 0.00 1 16.67 19A5
..........GGCAGAGGAGGGCTGTTCaTCCCc................................................. 17766_0_0_0_0_0_1 MATURE 1 14.29 0 0.00 1 16.67 18A4
..........GGCAGAGGAGGGCTGTTCTTCt................................................... 25288_1_0_0_0_0_0 MATURE 1 14.29 1 100.00 0 0.00 21
..........GGCAGAGGAGGGCTGTTCTTCCCTa................................................ 12369_0_0_0_0_0_1 MATURE 1 14.29 0 0.00 1 16.67 24
.........TGGCAGAGGAGGGCTGTTCTTCCCa................................................. 31365_0_0_0_0_0_1 MATURE 1 14.29 0 0.00 1 16.67 24
---------- ---------- ----------
7 1 6
(14.29) (85.71)
*** OTHER ***
__________________________________________________________________________________
CCAGGCCTTTGGCAGAGGAGGGCTGTTCTTCCCTTGAGTTTTATGACTGGGAGGAACTAGCCTTCTCTCAGCTTAGGAGTGG REF 2 174093005 - 174093086
GGCAGAGGAGGGCTGTTCTTCCC MATURE 2 174093016 - 174093119 mmu-miR-298 -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................GGAGGAACTAGCCTTCTCTCAGCT.......... 38577_1_0_0_0_0_0 OTHER 1 100.00 1 100.00 0 0 24
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 6 7 87.50%
OTHER 1 0 1 12.50%
---------- ---------- ----------
2 6 8
[END]