[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************
ID : mmu-mir-27b
DESCRIPTION : mmu-mir-27b MI0000142 Mus musculus miR-27b stem-loop
CHROMOSOME : 13
SPAN : 63402020 - 63402092
LENGTH : 73
SEQUENCE : AGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCT
OVERHANG THRESHOLD : 40%
**********************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-27b
ACCID : MI0000142
PARENT : mmu-mir-27b
CHROMOSOME : 13
START : 63402020
STOP : 63402092
OFFSET : 49..69
SEQUENCE : TTCACAGTGGCTAAGTTCTGC
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-27b*
ACCID : MI0000142
PARENT : mmu-mir-27b
CHROMOSOME : 13
START : 63402020
STOP : 63402092
OFFSET : 7..28
SEQUENCE : AGAGCTTAGCTGATTGGTGAAC
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________
AGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCT REF 13 63402020 - 63402092
TTCACAGTGGCTAAGTTCTGC MATURE 13 63402069 - 63402161 mmu-miR-27b +
AGAGCTTAGCTGATTGGTGAAC MATURESTAR 13 63402027 - 63402120 mmu-miR-27b* +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................GTTCACAGTGGCTAAGTTCTGCAt... 41666_29_0_0_0_0_39 MATURE 68 15.74 29 15.59 39 15.85 23
...............................................GTTCACAGTGGCTAAGTTCTGCAa... 28682_21_0_0_0_0_35 MATURE 56 12.96 21 11.29 35 14.23 23
...............................................GTTCACAGTGGCTAAGTTCTaCAt... 25986_25_0_0_0_0_20 MATURE 45 10.42 25 13.44 20 8.13 20A2
..............................................TGTTCACAGTGGCTAAGTTCTGCAt... 29441_11_0_0_0_0_22 MATURE 33 7.64 11 5.91 22 8.94 24
...............................................GTTCACAGTGGCTAAGTTCTGCA.... 39358_11_0_0_0_0_14 MATURE 25 5.79 11 5.91 14 5.69 23
............................................TTaGTTCACAGTGGCTAAGTTCTGt..... 11946_9_0_0_0_0_9 MATURE 18 4.17 9 4.84 9 3.66 2A21
...............................................GTTCACAGTGGCTAAGTTCTaCAa... 23386_5_0_0_0_0_7 MATURE 12 2.78 5 2.69 7 2.85 20A2
...........................................CTTaGTTCACAGTGGCTAAGTTCT....... 20360_4_0_0_0_0_6 MATURE 10 2.31 4 2.15 6 2.44 3A20
..............................................TGTTCACAGTGGCTAAGTTCTaCAt... 39407_3_0_0_0_0_5 MATURE 8 1.85 3 1.61 5 2.03 21A2
...............................................GTTCACAGTGGCTAAGTTCTaCA.... 39702_4_0_0_0_0_4 MATURE 8 1.85 4 2.15 4 1.63 20A2
...........................................CTTaGTTCACAGTGGCTAAGTTCTG...... 12255_2_0_0_0_0_5 MATURE 7 1.62 2 1.08 5 2.03 3A21
............................................TTaGTTCACAGTGGCTAAGTTCTGa..... 38875_5_0_0_0_0_2 MATURE 7 1.62 5 2.69 2 0.81 2A21
............................................TTaGTTCACAGTGGCTAAGTTCTGC..... 26794_4_0_0_0_0_3 MATURE 7 1.62 4 2.15 3 1.22 2A22
..............................................TGTTCACAGTGGCTAAGTTCTGCA.... 23433_1_0_0_0_0_5 MATURE 6 1.39 1 0.54 5 2.03 24
..............................................TGTTCACAGTGGCTAAGTTCTGCAa... 17337_1_0_0_0_0_5 MATURE 6 1.39 1 0.54 5 2.03 24
...............................................GTTCACAGTGGCTAAGTTaTGCA.... 11035_3_0_0_0_0_2 MATURE 5 1.16 3 1.61 2 0.81 18A4
...............................................GTTCACAGTGGCTAAGTTCTGCACt.. 40613_4_0_0_0_0_1 MATURE 5 1.16 4 2.15 1 0.41 24
................................................TTCACAGTGGCTAAGTTCTGCAa... 15319_4_0_0_0_0_1 MATURE 5 1.16 4 2.15 1 0.41 22
..............................................TGTTCACAGTGGCTAAGTaCTGCA.... 30831_1_0_0_0_0_3 MATURE 4 0.93 1 0.54 3 1.22 18A5
..............................................TGTTCACAGTGGCTAAGTTCTGCt.... 16272_1_0_0_0_0_3 MATURE 4 0.93 1 0.54 3 1.22 23
...............................................GTTCACAGTGGCTAAGTTCTGCt.... 43515_1_0_0_0_0_3 MATURE 4 0.93 1 0.54 3 1.22 22
..............................................TGTTCACAGTGGCTAAGTTCTGCAg... 24253_0_0_0_0_0_4 MATURE 4 0.93 0 0.00 4 1.63 24
...............................................GTTCACAGTGGCTAAGTTCTcCA.... 4869_2_0_0_0_0_1 MATURE 3 0.69 2 1.08 1 0.41 20C2
...............................................GTTCACAGTGGCTAAGTTCTGt..... 22909_1_0_0_0_0_2 MATURE 3 0.69 1 0.54 2 0.81 21
...............................................GTTCACAGTGGCTAAGTaCTGCA.... 25097_1_0_0_0_0_2 MATURE 3 0.69 1 0.54 2 0.81 17A5
..............................................TGTTCACAGTGGCTAAGTTCTGCg.... 12869_1_0_0_0_0_2 MATURE 3 0.69 1 0.54 2 0.81 23
...............................................GTTCACAGTGGCTAAGTTCTtCAt... 38270_2_0_0_0_0_1 MATURE 3 0.69 2 1.08 1 0.41 20T2
................................................TTCACAGTGGCTAAGTTCTaCAa... 41023_2_0_0_0_0_1 MATURE 3 0.69 2 1.08 1 0.41 19A2
...............................................GTTCACAGTGGCTAAGTTCTaCACt.. 28943_2_0_0_0_0_0 MATURE 2 0.46 2 1.08 0 0.00 20A3
...............................................GTTCACAGTGGCTAAGTTCTGCg.... 19797_1_0_0_0_0_1 MATURE 2 0.46 1 0.54 1 0.41 22
...........................................CTTaGTTCACAGTGGCTAAGTTCTa...... 3094_1_0_0_0_0_1 MATURE 2 0.46 1 0.54 1 0.41 3A20
...............................................GTTCACAGTGGCTAAGTTCTa...... 17689_2_0_0_0_0_0 MATURE 2 0.46 2 1.08 0 0.00 20
...............................................GTTCACAGTGGCTAAGTTCTGCc.... 5892_1_0_0_0_0_1 MATURE 2 0.46 1 0.54 1 0.41 22
...............................................GTTCACAGTGGCTAAGTTCTGCAg... 15839_0_0_0_0_0_2 MATURE 2 0.46 0 0.00 2 0.81 23
...............................................GTTCACAGTGGCTAAGTTCTtCACt.. 1691_0_0_0_0_0_2 MATURE 2 0.46 0 0.00 2 0.81 20T3
..............................................TGTTCACAGTGGCTAAGTTCTGaAC... 25909_0_0_0_0_0_2 MATURE 2 0.46 0 0.00 2 0.81 22A2
...............................................GTTtACAGTGGCTAAGTTCTGCAt... 1257_2_0_0_0_0_0 MATURE 2 0.46 2 1.08 0 0.00 3T19
..............................................TGTTCcCAGTGGCTAAGTTCTGCAa... 19788_0_0_0_0_0_2 MATURE 2 0.46 0 0.00 2 0.81 5C18
..............................................TGTTCACAGTGGCTAAGTTCTaCAa... 33590_0_0_0_0_0_2 MATURE 2 0.46 0 0.00 2 0.81 21A2
...............................................GTTCACAGTGGCTAAGTcCTGCA.... 16763_2_0_0_0_0_0 MATURE 2 0.46 2 1.08 0 0.00 17C5
.................................................TCACAGTGGCTAAGTTCTGt..... 37703_0_0_0_0_0_2 MATURE 2 0.46 0 0.00 2 0.81 19
...............................................GTTCACAGTGGCTAAGTTCTcCAt... 8481_2_0_0_0_0_0 MATURE 2 0.46 2 1.08 0 0.00 20C2
..............................................TGTTCACAGTGGCTAAGTTCTGt..... 2558_1_0_0_0_0_1 MATURE 2 0.46 1 0.54 1 0.41 22
...............................................GTTCACAGTGGCTAAGTTCTtCA.... 39967_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 20T2
................................................TTaACAGTGGCTAAGTTCTGCAa... 20196_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 2A19
...............................................GTTCACAGTGGCTAAGTTCTGa..... 17628_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 21
...............................................GTTCACAGTGGCTAAGTTCTcCAa... 37767_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 20C2
...............................................GTTCACAGTGGCTAAGTTCTGCAC... 32961_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 24
...............................................GTTCcCAGTGGCTAAGTTCTGCAa... 9345_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 4C18
................................................TTCACAGTGGCTAAGTTCTGCAgCT. 15473_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 22G2
...............................................GTTCACAGTGGCTAAaTTCTG...... 34026_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 15A5
...............................................GTTCACAGTGGCTAAGTTCTaCAC... 41569_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 20A3
...............................................GTTCACAGTGGCTAAGTgCTGCA.... 7988_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 17G5
...........................................CTTaGTTCACAGTGGCTAAGTTCTt...... 27194_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 3A20
...............................................GTTCACAGTGGCTAAGTTCTGCACC.. 25066_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 25
.................................................TCACAGTGGCTAAGTTCTGCAt... 23312_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 21
..................................................CACAGTGGCTAAGTTCTGCAt... 38011_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 20
..............................................TGTTCACAGTGGCTAAGTTaTGCA.... 34651_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 19A4
...........................................CTTTGTTCACAGTGGCTAAGTTCTG...... 212_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 25
...........................................CTgTGTTCACAGTGGCTAAGTTCTG...... 27954_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 2G22
...............................................GTTCACAGTGGCTAAGTTCaGCACC.. 10411_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 19A5
...............................................GTTCACAGTGGCTAAGTTtTGCA.... 18995_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 18T4
...........................................CTaTGTTCACAGTGGCTAAGTTCTG...... 7823_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 2A22
..............................................TGTTCACAGTGGCTAAGTgCTGCA.... 3046_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 18G5
..............................................TGTTCACAGTGGCTAAGTTCTGtAC... 9539_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 22T2
................................................TTCACAGTGGCTAAGTTCTaCAt... 23429_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 19A2
...............................................GTTCACAGTGGCTAAGTTCTcCAg... 29415_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 20C2
..............................................TGTTCACAGTGGCTAAGTTCTaCAg... 26889_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 21A2
..............................................TGTTCACAGTGGCTAAGTTCTaCA.... 31251_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 21A2
............................................TTTGTTCACAGTGGCTAAGTTtTGt..... 15327_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 21T2
...............................................GTTCACAGTGGCTAAGTTCTcCACa.. 43227_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 20C3
...............................................GTTCACAGTGGCTAAGcTCTGC..... 9001_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 16C5
................................................TTCACAGTGGCTAAGTTCTGCAt... 1474_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 22
..................................................CACAGTGGCTAAGTTCTGCAa... 22416_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 20
...............................................GTTCACAGTGGCTAAGTTCTGaAC... 970_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 21A2
..............................................TGTTCACAGTGGCTAAGTTCTGC..... 42222_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 23
...............................................GTTCACAGTGGCTAAGTTCTaCACa.. 23498_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 20A3
................................................TTCACAGTGGCTAAGTTCTGCAg... 34576_1_0_0_0_0_0 MATURE 1 0.23 1 0.54 0 0.00 22
...........................................CTTTGTTCACAGTGGCTAAGT.......... 10477_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 21
...............................................GTTCACAGTGGCTAAGTTCaGCAC... 27677_0_0_0_0_0_1 MATURE 1 0.23 0 0.00 1 0.41 19A4
---------- ---------- ----------
432 186 246
(43.06) (56.94)
*** MATURESTAR ***
_________________________________________________________________________
AGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCT REF 13 63402020 - 63402092
TTCACAGTGGCTAAGTTCTGC MATURE 13 63402069 - 63402161 mmu-miR-27b +
AGAGCTTAGCTGATTGGTGAAC MATURESTAR 13 63402027 - 63402120 mmu-miR-27b* +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....GCAGAGCTTAGCTGATTGGTGAACA............................................. 44297_0_0_0_0_0_1 MATURESTAR 1 14.29 0 0.00 1 20.00 25
......AGAGCTTAGCTGATTGGTGAAa.............................................. 9789_1_0_0_0_0_0 MATURESTAR 1 14.29 1 50.00 0 0.00 21
......AGAGCTTAGCTGATTGGTGAtCAGT........................................... 35302_0_0_0_0_0_1 MATURESTAR 1 14.29 0 0.00 1 20.00 20T4
......AGAGCTTAGCTGATTGGTGAtCA............................................. 44212_1_0_0_0_0_0 MATURESTAR 1 14.29 1 50.00 0 0.00 20T2
......AGAGCTTAGCTGATTGGTGgACA............................................. 33090_0_0_0_0_0_1 MATURESTAR 1 14.29 0 0.00 1 20.00 19G3
......AGAGCTTAGCTGATTGGTGAAt.............................................. 33915_0_0_0_0_0_1 MATURESTAR 1 14.29 0 0.00 1 20.00 21
......AGAGCTTAGCTGATTGGTGAgCAGT........................................... 22323_0_0_0_0_0_1 MATURESTAR 1 14.29 0 0.00 1 20.00 20G4
---------- ---------- ----------
7 2 5
(28.57) (71.43)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 186 246 432 98.41%
MATURESTAR 2 5 7 1.59%
---------- ---------- ----------
188 251 439
[END]