[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-24-1
DESCRIPTION : mmu-mir-24-1 MI0000231 Mus musculus miR-24-1 stem-loop
CHROMOSOME : 13
SPAN : 63402516 - 63402583
LENGTH : 68
SEQUENCE : CTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGGCTCAGTTCAGCAGGAACAGGAG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-24
ACCID : MI0000231
PARENT : mmu-mir-24-1
CHROMOSOME : 13
START : 63402516
STOP : 63402583
OFFSET : 44..65
SEQUENCE : TGGCTCAGTTCAGCAGGAACAG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-24-1*
ACCID : MI0000231
PARENT : mmu-mir-24-1
CHROMOSOME : 13
START : 63402516
STOP : 63402583
OFFSET : 6..28
SEQUENCE : GTGCCTACTGAGCTGATATCAGT
STRAND : +
******************************
*** MATURESTAR ***
____________________________________________________________________
CTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGGCTCAGTTCAGCAGGAACAGGAG REF 13 63402516 - 63402583
TGGCTCAGTTCAGCAGGAACAG MATURE 13 63402560 - 63402648 mmu-miR-24 +
GTGCCTACTGAGCTGATATCAGT MATURESTAR 13 63402522 - 63402611 mmu-miR-24-1* +
____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....GGTGCCTACTGAGCTGAaATCAG.......................................... 39887_0_0_0_0_0_3 MATURESTAR 3 20.00 0 0.00 3 33.33 17A5
....GGTGCCTACTGAGCTGATATC............................................ 18893_0_0_0_0_0_3 MATURESTAR 3 20.00 0 0.00 3 33.33 21
....GGTGCCTACTGAGCTGAaATCAGT......................................... 15135_0_0_0_0_0_2 MATURESTAR 2 13.33 0 0.00 2 22.22 17A6
....GGTGCCTACTGAGCTGATATCAGT......................................... 44137_2_0_0_0_0_0 MATURESTAR 2 13.33 2 33.33 0 0.00 24
....GGTGCCTACTGAGCTGATATa............................................ 9909_2_0_0_0_0_0 MATURESTAR 2 13.33 2 33.33 0 0.00 20
....GGTGCCTACTGAGCTGATATCAG.......................................... 22166_0_0_0_0_0_1 MATURESTAR 1 6.67 0 0.00 1 11.11 23
...CGGTGCCTACTGAGCTGAaATCAG.......................................... 31998_1_0_0_0_0_0 MATURESTAR 1 6.67 1 16.67 0 0.00 18A5
....GGTGCCTACTGAGCTGATATCAa.......................................... 22572_1_0_0_0_0_0 MATURESTAR 1 6.67 1 16.67 0 0.00 22
---------- ---------- ----------
15 6 9
(40.00) (60.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURESTAR 6 9 15 100.00%
---------- ---------- ----------
6 9 15
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