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REFERENCE HAIRPIN
***********************************************************************************************************************************
ID                 : mmu-mir-219-1
DESCRIPTION        : mmu-mir-219-1 MI0000702 Mus musculus miR-219-1 stem-loop
CHROMOSOME         : 17
SPAN               : 34161928 - 34162037
LENGTH             : 110
SEQUENCE           : CCGTCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCGAGTCTCTGGCTCCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGGGGG
OVERHANG THRESHOLD : 40%
***********************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-219
ACCID      : MI0000702
PARENT     : mmu-mir-219-1
CHROMOSOME : 17
START      : 34161928
STOP       : 34162037
OFFSET     : 21..41
SEQUENCE   : TGATTGTCCAAACGCAATTCT
STRAND     : -
******************************



*** MATURE ***
______________________________________________________________________________________________________________
CCGTCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCGAGTCTCTGGCTCCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGGGGG REF                  17                   34161928 - 34162037  
                    TGATTGTCCAAACGCAATTCT                                                                      MATURE               17                   34161949 - 34162078  mmu-miR-219          -                    
______________________________________________________________________________________________________________

                                                                                                          -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
....................TGATTGTCCAAACGCAATTCTCG....................................................................   31694_6_0_0_0_0_6       MATURE           12        31.58            6        31.58            6        31.58                        23   
....................TGATTGTCCAAACGCAATcCTCG....................................................................   10078_2_0_0_0_0_2       MATURE            4        10.53            2        10.53            2        10.53                      18C4   
....................TGATTGTCCAAACGCAATaCTCG....................................................................   33256_3_0_0_0_0_1       MATURE            4        10.53            3        15.79            1         5.26                      18A4   
....................TGATTGTCCAAACGCAAaTCTCG....................................................................   42446_2_0_0_0_0_2       MATURE            4        10.53            2        10.53            2        10.53                      17A5   
....................TGtTTGTCCAAACGCAATTCTCG....................................................................   15206_1_0_0_0_0_3       MATURE            4        10.53            1         5.26            3        15.79                      2T20   
....................TGATTGTCCAAACGCAAgTCTCG....................................................................   42593_1_0_0_0_0_2       MATURE            3         7.89            1         5.26            2        10.53                      17G5   
....................TGATTGTCCAAACGCAATTCTCGt...................................................................   39149_2_0_0_0_0_0       MATURE            2         5.26            2        10.53            0         0.00                        23   
....................TGATTGTCCAAACGCAATcCTCGA...................................................................   30434_1_0_0_0_0_1       MATURE            2         5.26            1         5.26            1         5.26                      18C5   
....................TGATTGTCCAAACGCAATTCTCGA...................................................................   24134_0_0_0_0_0_1       MATURE            1         2.63            0         0.00            1         5.26                        24   
....................TGATTGTCCAAACGCAATgCTCG....................................................................   12614_0_0_0_0_0_1       MATURE            1         2.63            0         0.00            1         5.26                      18G4   
....................TGATTGTCCAAACGCAAaTCTC.....................................................................   28172_1_0_0_0_0_0       MATURE            1         2.63            1         5.26            0         0.00                      17A4   
                                                                                                                                                   ----------                ----------                ----------   
                                                                                                                                                           38                        19                        19                                          
                                                                                                                                                                                (50.00)                   (50.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE              19              19              38         100.00%
                     ----------      ----------      ----------                
                             19              19              38                



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