[BEGIN]

REFERENCE HAIRPIN
***********************************************************************************************************************************
ID                 : mmu-mir-210
DESCRIPTION        : mmu-mir-210 MI0000695 Mus musculus miR-210 stem-loop
CHROMOSOME         : 7
SPAN               : 148407283 - 148407392
LENGTH             : 110
SEQUENCE           : CCGGGGCAGTCCCTCCAGGCTCAGGACAGCCACTGCCCACCGCACACTGCGTTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGCGAACC
OVERHANG THRESHOLD : 40%
***********************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-210
ACCID      : MI0000695
PARENT     : mmu-mir-210
CHROMOSOME : 7
START      : 148407283
STOP       : 148407392
OFFSET     : 66..87
SEQUENCE   : CTGTGCGTGTGACAGCGGCTGA
STRAND     : -
******************************



*** MATURE ***
______________________________________________________________________________________________________________
CCGGGGCAGTCCCTCCAGGCTCAGGACAGCCACTGCCCACCGCACACTGCGTTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGCGAACC REF                  7                    148407283 - 148407392 
                                                                 CTGTGCGTGTGACAGCGGCTGA                        MATURE               7                    148407349 - 148407479 mmu-miR-210          -                    
______________________________________________________________________________________________________________

                                                                                                          -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.................................................................CTGTGCGTGTGACAGCGtCTGA........................   17982_1_0_0_0_0_3       MATURE            4        19.05            1        10.00            3        27.27                      17T4   
.................................................................CTGTGCGTGTGACAGCGGCTGATt......................   14193_1_0_0_0_0_1       MATURE            2         9.52            1        10.00            1         9.09                        23   
.................................................................CTGTGCGTGTGACAGCGaCTGA........................   19981_1_0_0_0_0_1       MATURE            2         9.52            1        10.00            1         9.09                      17A4   
.................................................................CTGTGCGTGTGACAGCGGCTGAT.......................   39100_1_0_0_0_0_1       MATURE            2         9.52            1        10.00            1         9.09                        23   
.................................................................CTGTGCGTGTGACAGCGGCTGA........................   25111_1_0_0_0_0_1       MATURE            2         9.52            1        10.00            1         9.09                        22   
.................................................................CTGTGCGTGTGACAGCGGCTGAa.......................   32247_2_0_0_0_0_0       MATURE            2         9.52            2        20.00            0         0.00                        22   
.................................................................CTGTGCGTGTGACAGCGGCTGATa......................   41416_0_0_0_0_0_1       MATURE            1         4.76            0         0.00            1         9.09                        23   
.................................................................CTGTGCGTGTGgCAGCGGCTGATCc.....................   16893_0_0_0_0_0_1       MATURE            1         4.76            0         0.00            1         9.09                     11G12   
.................................................................CTGTGCGTGTGACAGCGaCTGAa.......................    3573_1_0_0_0_0_0       MATURE            1         4.76            1        10.00            0         0.00                      17A4   
...............................................................CACTGTGCGTGTGACAGCGaCTGA........................   12904_0_0_0_0_0_1       MATURE            1         4.76            0         0.00            1         9.09                      19A4   
.................................................................CTGTGCGTGTGACAGCtGCTGA........................    6890_0_0_0_0_0_1       MATURE            1         4.76            0         0.00            1         9.09                      16T5   
.................................................................CTGTGCGTGTGACAGCGGCTaAT.......................   40887_1_0_0_0_0_0       MATURE            1         4.76            1        10.00            0         0.00                      20A2   
.................................................................CTGTGCGTGTGACAGCGGCaGAT.......................   28205_1_0_0_0_0_0       MATURE            1         4.76            1        10.00            0         0.00                      19A3   
                                                                                                                                                   ----------                ----------                ----------   
                                                                                                                                                           21                        10                        11                                          
                                                                                                                                                                                (47.62)                   (52.38)                                       




*** OTHER ***
______________________________________________________________________________________________________________
CCGGGGCAGTCCCTCCAGGCTCAGGACAGCCACTGCCCACCGCACACTGCGTTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGCGAACC REF                  7                    148407283 - 148407392 
                                                                 CTGTGCGTGTGACAGCGGCTGA                        MATURE               7                    148407349 - 148407479 mmu-miR-210          -                    
______________________________________________________________________________________________________________

                                                                                                          -SEQ-            -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........................AGCCACTGCCCACCGCACACTG..............................................................   518_0_0_0_0_0_2        OTHER            2       100.00            0            0            2       100.00                        22   
                                                                                                                                                 ----------                ----------                ----------   
                                                                                                                                                          2                         0                         2                                          
                                                                                                                                                                               (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE              10              11              21          91.30%
          OTHER               0               2               2           8.70%
                     ----------      ----------      ----------                
                             10              13              23                



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