[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-210
DESCRIPTION : mmu-mir-210 MI0000695 Mus musculus miR-210 stem-loop
CHROMOSOME : 7
SPAN : 148407283 - 148407392
LENGTH : 110
SEQUENCE : CCGGGGCAGTCCCTCCAGGCTCAGGACAGCCACTGCCCACCGCACACTGCGTTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGCGAACC
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-210
ACCID : MI0000695
PARENT : mmu-mir-210
CHROMOSOME : 7
START : 148407283
STOP : 148407392
OFFSET : 66..87
SEQUENCE : CTGTGCGTGTGACAGCGGCTGA
STRAND : -
******************************
*** MATURE ***
______________________________________________________________________________________________________________
CCGGGGCAGTCCCTCCAGGCTCAGGACAGCCACTGCCCACCGCACACTGCGTTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGCGAACC REF 7 148407283 - 148407392
CTGTGCGTGTGACAGCGGCTGA MATURE 7 148407349 - 148407479 mmu-miR-210 -
______________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................................CTGTGCGTGTGACAGCGtCTGA........................ 17982_1_0_0_0_0_3 MATURE 4 19.05 1 10.00 3 27.27 17T4
.................................................................CTGTGCGTGTGACAGCGGCTGATt...................... 14193_1_0_0_0_0_1 MATURE 2 9.52 1 10.00 1 9.09 23
.................................................................CTGTGCGTGTGACAGCGaCTGA........................ 19981_1_0_0_0_0_1 MATURE 2 9.52 1 10.00 1 9.09 17A4
.................................................................CTGTGCGTGTGACAGCGGCTGAT....................... 39100_1_0_0_0_0_1 MATURE 2 9.52 1 10.00 1 9.09 23
.................................................................CTGTGCGTGTGACAGCGGCTGA........................ 25111_1_0_0_0_0_1 MATURE 2 9.52 1 10.00 1 9.09 22
.................................................................CTGTGCGTGTGACAGCGGCTGAa....................... 32247_2_0_0_0_0_0 MATURE 2 9.52 2 20.00 0 0.00 22
.................................................................CTGTGCGTGTGACAGCGGCTGATa...................... 41416_0_0_0_0_0_1 MATURE 1 4.76 0 0.00 1 9.09 23
.................................................................CTGTGCGTGTGgCAGCGGCTGATCc..................... 16893_0_0_0_0_0_1 MATURE 1 4.76 0 0.00 1 9.09 11G12
.................................................................CTGTGCGTGTGACAGCGaCTGAa....................... 3573_1_0_0_0_0_0 MATURE 1 4.76 1 10.00 0 0.00 17A4
...............................................................CACTGTGCGTGTGACAGCGaCTGA........................ 12904_0_0_0_0_0_1 MATURE 1 4.76 0 0.00 1 9.09 19A4
.................................................................CTGTGCGTGTGACAGCtGCTGA........................ 6890_0_0_0_0_0_1 MATURE 1 4.76 0 0.00 1 9.09 16T5
.................................................................CTGTGCGTGTGACAGCGGCTaAT....................... 40887_1_0_0_0_0_0 MATURE 1 4.76 1 10.00 0 0.00 20A2
.................................................................CTGTGCGTGTGACAGCGGCaGAT....................... 28205_1_0_0_0_0_0 MATURE 1 4.76 1 10.00 0 0.00 19A3
---------- ---------- ----------
21 10 11
(47.62) (52.38)
*** OTHER ***
______________________________________________________________________________________________________________
CCGGGGCAGTCCCTCCAGGCTCAGGACAGCCACTGCCCACCGCACACTGCGTTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGCGAACC REF 7 148407283 - 148407392
CTGTGCGTGTGACAGCGGCTGA MATURE 7 148407349 - 148407479 mmu-miR-210 -
______________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................AGCCACTGCCCACCGCACACTG.............................................................. 518_0_0_0_0_0_2 OTHER 2 100.00 0 0 2 100.00 22
---------- ---------- ----------
2 0 2
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 10 11 21 91.30%
OTHER 0 2 2 8.70%
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10 13 23
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