[BEGIN]

REFERENCE HAIRPIN
*******************************************************************************************
ID                 : mmu-mir-200b
DESCRIPTION        : mmu-mir-200b MI0000243 Mus musculus miR-200b stem-loop
CHROMOSOME         : 4
SPAN               : 155429790 - 155429859
LENGTH             : 70
SEQUENCE           : GCCGTGGCCATCTTACTGGGCAGCATTGGATAGTGTCTGATCTCTAATACTGCCTGGTAATGATGACGGC
OVERHANG THRESHOLD : 40%
*******************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-200b
ACCID      : MI0000243
PARENT     : mmu-mir-200b
CHROMOSOME : 4
START      : 155429790
STOP       : 155429859
OFFSET     : 45..66
SEQUENCE   : TAATACTGCCTGGTAATGATGA
STRAND     : -
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-200b*
ACCID      : MI0000243
PARENT     : mmu-mir-200b
CHROMOSOME : 4
START      : 155429790
STOP       : 155429859
OFFSET     : 9..30
SEQUENCE   : CATCTTACTGGGCAGCATTGGA
STRAND     : -
******************************



*** MATURE ***
______________________________________________________________________
GCCGTGGCCATCTTACTGGGCAGCATTGGATAGTGTCTGATCTCTAATACTGCCTGGTAATGATGACGGC REF                  4                    155429790 - 155429859 
                                            TAATACTGCCTGGTAATGATGA     MATURE               4                    155429835 - 155429925 mmu-miR-200b         -                    
        CATCTTACTGGGCAGCATTGGA                                         MATURESTAR           4                    155429799 - 155429889 mmu-miR-200b*        -                    
______________________________________________________________________

                                                                  -SEQ-                -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
............................................TAATACTGCCTGGTAATGATGA.....   43028_34_0_0_0_0_47       MATURE           81        20.45           34        20.00           47        20.80                        22   
............................................TAATACTGCCTGGTAATGATG......   41479_22_0_0_0_0_34       MATURE           56        14.14           22        12.94           34        15.04                        21   
............................................TAATACTGCCTGGTAAcGATGA.....   21824_13_0_0_0_0_22       MATURE           35         8.84           13         7.65           22         9.73                      16C5   
............................................TAATACTGCCTGGTAATGATGAa....    35175_13_0_0_0_0_9       MATURE           22         5.56           13         7.65            9         3.98                        22   
............................................TAATACTGCCTGGTAAaGATGA.....    40076_10_0_0_0_0_8       MATURE           18         4.55           10         5.88            8         3.54                      16A5   
............................................TAATACTGCCTGGTAAgGATGA.....    41262_5_0_0_0_0_11       MATURE           16         4.04            5         2.94           11         4.87                      16G5   
............................................TAATACTGCCTGGTAATGATGt.....     29916_4_0_0_0_0_9       MATURE           13         3.28            4         2.35            9         3.98                        21   
............................................TAATACTGCCTGGTAAcGATGt.....     42615_4_0_0_0_0_6       MATURE           10         2.53            4         2.35            6         2.65                      16C4   
............................................TAATACTGCCTGGTAATGAT.......     32782_6_0_0_0_0_4       MATURE           10         2.53            6         3.53            4         1.77                        20   
............................................TAATACTGCCTGGTAATGATGAt....     21216_3_0_0_0_0_5       MATURE            8         2.02            3         1.76            5         2.21                        22   
............................................TAATACTGCCTGGTAATaATGA.....     39521_3_0_0_0_0_5       MATURE            8         2.02            3         1.76            5         2.21                      17A4   
............................................TAATACTGCCTGGTAAgGATGt.....     30519_5_0_0_0_0_2       MATURE            7         1.77            5         2.94            2         0.88                      16G4   
............................................TAATACTGCCTGGTAcTGATG......     43784_3_0_0_0_0_3       MATURE            6         1.52            3         1.76            3         1.33                      15C5   
............................................TAATACTGCCTGGTAATGATGACt...     17283_3_0_0_0_0_3       MATURE            6         1.52            3         1.76            3         1.33                        23   
............................................TAATACTGCCTGGTAATGcTGACt...     11049_2_0_0_0_0_4       MATURE            6         1.52            2         1.18            4         1.77                      18C4   
............................................TAATACTGCCTGGTAAcGATG......     20687_1_0_0_0_0_4       MATURE            5         1.26            1         0.59            4         1.77                      16C4   
............................................TAATACTGCCTGGTAATaATG......     43856_0_0_0_0_0_5       MATURE            5         1.26            0         0.00            5         2.21                      17A3   
............................................TAATACTGCCTGGTAgTGATG......     35334_2_0_0_0_0_2       MATURE            4         1.01            2         1.18            2         0.88                      15G5   
............................................TAATACTGCCTGGTAATGATGAC....     36327_2_0_0_0_0_2       MATURE            4         1.01            2         1.18            2         0.88                        23   
.............................................AATACTGCCTGGTAATGATG......     29885_1_0_0_0_0_2       MATURE            3         0.76            1         0.59            2         0.88                        20   
............................................TAATACTGCCTGGTAATGA........     39704_0_0_0_0_0_3       MATURE            3         0.76            0         0.00            3         1.33                        19   
............................................TAATACTGCCTGGTAATGAcGA.....     24818_2_0_0_0_0_1       MATURE            3         0.76            2         1.18            1         0.44                      19C2   
............................................TAATACTGCCTGGTAATtATGA.....     39936_2_0_0_0_0_1       MATURE            3         0.76            2         1.18            1         0.44                      17T4   
............................................TAATACTGCCTGGTAAaGATG......     18891_2_0_0_0_0_1       MATURE            3         0.76            2         1.18            1         0.44                      16A4   
............................................TAATACTGCCTGGTAAaGATGt.....     41870_1_0_0_0_0_2       MATURE            3         0.76            1         0.59            2         0.88                      16A4   
............................................TAATACTGCCTGGTAATGAc.......     38022_1_0_0_0_0_1       MATURE            2         0.51            1         0.59            1         0.44                        19   
............................................TAATACTGCCTGGTAATcATGA.....     18992_1_0_0_0_0_1       MATURE            2         0.51            1         0.59            1         0.44                      17C4   
............................................TAATACTGCCTGGTAATGtTGACt...      6998_0_0_0_0_0_2       MATURE            2         0.51            0         0.00            2         0.88                      18T4   
.............................................AATACTGCCTGGTAAcGATGA.....     44159_0_0_0_0_0_2       MATURE            2         0.51            0         0.00            2         0.88                      15C5   
............................................TAATACTGCCTGGTAATGAaGA.....     26706_2_0_0_0_0_0       MATURE            2         0.51            2         1.18            0         0.00                      19A2   
............................................TAATACTGCCTGGTAATGATGg.....     34816_2_0_0_0_0_0       MATURE            2         0.51            2         1.18            0         0.00                        21   
............................................TAATACTGCCTGGTAAaGATGc.....     28767_2_0_0_0_0_0       MATURE            2         0.51            2         1.18            0         0.00                      16A4   
............................................TAATACTGCCTGGTAATaATGt.....     19269_2_0_0_0_0_0       MATURE            2         0.51            2         1.18            0         0.00                      17A3   
............................................TAATACTGCCTGGTAATGATc......     22959_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                        20   
.............................................AAgACTGCCTGGTAATGATGAg....     37281_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      2G18   
............................................TAATACTGCCTGGTAATGAaGACt...     17594_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      19A3   
...........................................CTAATACTGCCTGGTAATGAaGACa...      1558_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      20A3   
............................................TAATACTGCCTGGTAtTGATG......     37318_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      15T5   
............................................TAATACTGCCTGGTAATcATGt.....     41830_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      17C3   
............................................TAATACTGCCTGGTAATGAcGAa....     13679_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      19C2   
.............................................AATACTGCCTGGTAATGATGAg....     29753_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                        21   
............................................TAATACTGCCTGGTAATGtTGAa....     12146_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      18T3   
.............................................AATACTGCCTGGTAATGcTGACt...      5825_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      17C4   
.............................................AATACTGCCTGGTAAaGATGA.....      2379_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      15A5   
...........................................CTAATACTGCCTGGTAATGATGA.....      1672_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                        23   
...........................................CTAATACTGCCTGGTAATGAaGAt....     22002_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      20A2   
............................................TAATACTGCCTGGTAAcGATGg.....     22074_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      16C4   
.............................................AAaACTGCCTGGTAATGATGAa....     17975_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      2A18   
............................................TAAaACTGCCTGGTAATGATGA.....      2555_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      3A18   
............................................TAATACTGCCTGGTAATGATa......     37675_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                        20   
...........................................CTAATACTGCCTGGTAAgGATGA.....     13483_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      17G5   
............................................TAATACTGCCTGGTAATaATGAC....     23114_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      17A5   
............................................TAATACTGCCTGGTAATGATaACt...     14037_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      20A2   
.............................................AATACTGCCTGGTAATGATGACc...      9800_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                        22   
............................................TAATACTGCCTGGTAATGAg.......     36880_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                        19   
.............................................AATACTGCCTGGTAATGATGAa....     39311_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                        21   
............................................TAATACTGCCTGGTAATGgTG......        83_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      18G2   
.............................................AATACTGCCTGGTAATGATGA.....     38493_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                        21   
............................................TAAgACTGCCTGGTAATGATGA.....     24976_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      3G18   
............................................TAATACTGCCTGGTAATGATaACc...     11347_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      20A2   
............................................TAATACTGCCTGGTAATaATGAt....     23873_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      17A4   
.............................................AATACTGCCTGGTAATGAcGAa....     40488_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      18C2   
............................................TAATACTGCCTGaTAATGATGA.....     41321_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      12A9   
............................................TAAaACTGCCTGGTAATGATG......     14755_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      3A17   
............................................TAATACTGCCTGGTAATGtTG......      6868_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      18T2   
............................................TAATACTGCCTGGTAATGATGACa...     17494_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                        23   
............................................TAATACTGCCTGGTAATGAcGACt...      4475_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      19C3   
............................................TAATACTGCCTGGTAATGATGAg....     31346_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                        22   
............................................TAATACTGCCTGGTAATGAaGAt....     10602_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      19A2   
..............................................ATACTGCCTGGTAATGAcGACt...      4999_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      17C3   
............................................TAATACTGCCTGGTAATGgTGACt...     28749_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      18G4   
............................................TAAaACTGCCTGGTAATGATGAt....      7130_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      3A18   
............................................TAATACTGCCTGGTAAgGATG......      2547_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                      16G4   
...........................................CTAATACTGCCTGGTAAaGATGg.....     31392_1_0_0_0_0_0       MATURE            1         0.25            1         0.59            0         0.00                      17A4   
............................................TAATACTGCCTGGTAATGATt......     38609_0_0_0_0_0_1       MATURE            1         0.25            0         0.00            1         0.44                        20   
                                                                                                             ----------                ----------                ----------   
                                                                                                                    396                       170                       226                                          
                                                                                                                                          (42.93)                   (57.07)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE             170             226             396         100.00%
                     ----------      ----------      ----------                
                            170             226             396                



[END]
