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REFERENCE HAIRPIN
*********************************************************************************************************
ID                 : mmu-mir-19b-2
DESCRIPTION        : mmu-mir-19b-2 MI0000546 Mus musculus miR-19b-2 stem-loop
CHROMOSOME         : X
SPAN               : 50095160 - 50095243
LENGTH             : 84
SEQUENCE           : ACTTACGATTAGTTTTGCAGATTTGCAGTTCAGCGTATATGTGAATATATGGCTGTGCAAATCCATGCAAAACTGATTGTGGGA
OVERHANG THRESHOLD : 40%
*********************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-19b
ACCID      : MI0000546
PARENT     : mmu-mir-19b-2
CHROMOSOME : X
START      : 50095160
STOP       : 50095243
OFFSET     : 54..76
SEQUENCE   : TGTGCAAATCCATGCAAAACTGA
STRAND     : -
******************************



*** MATURE ***
____________________________________________________________________________________
ACTTACGATTAGTTTTGCAGATTTGCAGTTCAGCGTATATGTGAATATATGGCTGTGCAAATCCATGCAAAACTGATTGTGGGA REF                  X                    50095160 - 50095243  
                                                     TGTGCAAATCCATGCAAAACTGA         MATURE               X                    50095214 - 50095319  mmu-miR-19b          -                    
____________________________________________________________________________________

                                                                                -SEQ-                -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.....................................................TGTGCAAATCCATGCAAAcCTGAT........   37087_16_0_0_0_0_43       MATURE           59        37.82           16        36.36           43        38.39                      18C5   
.....................................................TGTGCAAATCCATGCAAAACTGAT........   10071_10_0_0_0_0_38       MATURE           48        30.77           10        22.73           38        33.93                        24   
.....................................................TGTGCAAATCCATGCAAAgCTGAT........      4194_6_0_0_0_0_7       MATURE           13         8.33            6        13.64            7         6.25                      18G5   
.....................................................TGTGCAAATCCATGCAAAtCTGAT........     30738_3_0_0_0_0_5       MATURE            8         5.13            3         6.82            5         4.46                      18T5   
.....................................................TGTGCAAATCCATGCAAAACTGATa.......     32671_0_0_0_0_0_6       MATURE            6         3.85            0         0.00            6         5.36                        24   
.....................................................TGTGCAAATCCATGCAAAACTGATT.......      1478_2_0_0_0_0_3       MATURE            5         3.21            2         4.55            3         2.68                        25   
.....................................................TGTGtAAATCCATGCAAAACT...........     42035_3_0_0_0_0_2       MATURE            5         3.21            3         6.82            2         1.79                      4T16   
..................................................GGCTGTGCAAATCCATGCAAAACTG..........     26785_1_0_0_0_0_3       MATURE            4         2.56            1         2.27            3         2.68                        25   
......................................................GTGCAAATCCATGCAAAgCTGAT........     41655_1_0_0_0_0_1       MATURE            2         1.28            1         2.27            1         0.89                      17G5   
......................................................GTGCAAATCCATGCAAAACTGAT........     31123_1_0_0_0_0_1       MATURE            2         1.28            1         2.27            1         0.89                        23   
.....................................................TGTGCAAATCCATGCAAAACTGATc.......      4751_0_0_0_0_0_1       MATURE            1         0.64            0         0.00            1         0.89                        24   
.......................................................TGCAAATCCATGCAAAcCTGAT........     25576_0_0_0_0_0_1       MATURE            1         0.64            0         0.00            1         0.89                      16C5   
.....................................................TGTGCAAATCCATGCAAAACaGATT.......      1434_0_0_0_0_0_1       MATURE            1         0.64            0         0.00            1         0.89                      20A4   
.....................................................TGTGCAAATCCATGCAAAAtTGAT........     34055_1_0_0_0_0_0       MATURE            1         0.64            1         2.27            0         0.00                      19T4   
                                                                                                                           ----------                ----------                ----------   
                                                                                                                                  156                        44                       112                                          
                                                                                                                                                        (28.21)                   (71.79)                                       




*** OTHER ***
____________________________________________________________________________________
ACTTACGATTAGTTTTGCAGATTTGCAGTTCAGCGTATATGTGAATATATGGCTGTGCAAATCCATGCAAAACTGATTGTGGGA REF                  X                    50095160 - 50095243  
                                                     TGTGCAAATCCATGCAAAACTGA         MATURE               X                    50095214 - 50095319  mmu-miR-19b          -                    
____________________________________________________________________________________

                                                                                -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..........AGTTTTGCAGATTTGCAGTcCAG....................................................   24813_0_0_0_0_0_1        OTHER            1        25.00            0            0            1        25.00                      19C3   
..........AGTTTTGCAGATTTGCAGTTCAGC...................................................   43358_0_0_0_0_0_1        OTHER            1        25.00            0            0            1        25.00                        24   
.......ATgAGTTTTGCAGATTTGCAGTTCA.....................................................    5184_0_0_0_0_0_1        OTHER            1        25.00            0            0            1        25.00                      2G22   
..........AGTTTTGCAGATTTGCAGTTCAG....................................................   24934_0_0_0_0_0_1        OTHER            1        25.00            0            0            1        25.00                        23   
                                                                                                                         ----------                ----------                ----------   
                                                                                                                                  4                         0                         4                                          
                                                                                                                                                       (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE              44             112             156          97.50%
          OTHER               0               4               4           2.50%
                     ----------      ----------      ----------                
                             44             116             160                



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