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REFERENCE HAIRPIN
*********************************************************************************************************************************************************
ID                 : mmu-mir-1983
DESCRIPTION        : mmu-mir-1983 MI0009990 Mus musculus miR-1983 stem-loop
CHROMOSOME         : 13
SPAN               : 21988787 - 21988918
LENGTH             : 132
SEQUENCE           : CCTTTACAGAGAAAGCATGCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATACAGCAGTATATGTGCGGGTGATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTCTTCCCTTTCCGCC
OVERHANG THRESHOLD : 40%
*********************************************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-1983
ACCID      : MI0009990
PARENT     : mmu-mir-1983
CHROMOSOME : 13
START      : 21988787
STOP       : 21988918
OFFSET     : 100..120
SEQUENCE   : CTCACCTGGAGCATGTTTTCT
STRAND     : -
******************************



*** OTHER ***
____________________________________________________________________________________________________________________________________
CCTTTACAGAGAAAGCATGCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATACAGCAGTATATGTGCGGGTGATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTCTTCCCTTTCCGCC REF                  13                   21988787 - 21988918  
                                                                                                   CTCACCTGGAGCATGTTTTCT             MATURE               13                   21988887 - 21989038  mmu-miR-1983         -                    
____________________________________________________________________________________________________________________________________

                                                                                                                                -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..................GCTCCAGTGGCGCAATCGGTTAG............................................................................................   17552_0_0_0_0_0_2        OTHER            2        22.22            0         0.00            2        28.57                        23   
..................GCTCCAGTGGCGCAATCGaTTAG............................................................................................   32008_0_0_0_0_0_2        OTHER            2        22.22            0         0.00            2        28.57                      18A4   
............................CGCAATCGGTTAGCGCGCGGTACTT................................................................................    7084_1_0_0_0_0_0        OTHER            1        11.11            1        50.00            0         0.00                        25   
........................GTGGCGCAATCGGTTAGCGCaCGGg....................................................................................   24155_0_0_0_0_0_1        OTHER            1        11.11            0         0.00            1        14.29                      20A3   
..................GCTCCAGTGGCGCAATCGGTTc.............................................................................................    8827_0_0_0_0_0_1        OTHER            1        11.11            0         0.00            1        14.29                        21   
.........................TGGCGCAATCGGTTAGCGCGCGGTA...................................................................................   15847_1_0_0_0_0_0        OTHER            1        11.11            1        50.00            0         0.00                        25   
.................................TCGGTTAGCGCGCGGTACTT................................................................................   39007_0_0_0_0_0_1        OTHER            1        11.11            0         0.00            1        14.29                        20   
                                                                                                                                                                         ----------                ----------                ----------   
                                                                                                                                                                                  9                         2                         7                                          
                                                                                                                                                                                                      (22.22)                   (77.78)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
          OTHER               2               7               9         100.00%
                     ----------      ----------      ----------                
                              2               7               9                



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