[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************
ID : mmu-mir-196b
DESCRIPTION : mmu-mir-196b MI0001151 Mus musculus miR-196b stem-loop
CHROMOSOME : 6
SPAN : 52180080 - 52180164
LENGTH : 85
SEQUENCE : AACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTG
OVERHANG THRESHOLD : 40%
**********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-196b
ACCID : MI0001151
PARENT : mmu-mir-196b
CHROMOSOME : 6
START : 52180080
STOP : 52180164
OFFSET : 16..37
SEQUENCE : TAGGTAGTTTCCTGTTGTTGGG
STRAND : -
******************************
*** MATURE ***
_____________________________________________________________________________________
AACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTG REF 6 52180080 - 52180164
TAGGTAGTTTCCTGTTGTTGGG MATURE 6 52180096 - 52180201 mmu-miR-196b -
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............ATgTAGGTAGTTTCCTGTTGTTa................................................... 2058_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 2G19
...............TAGGTAGTTTCCTGTTGTTGGGt................................................ 18361_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 22
............ATgTAGGTAGTTTCCTGTTGTTG................................................... 26850_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 2G20
---------- ---------- ----------
3 3 0
(100.00) (0.00)
*** OTHER ***
_____________________________________________________________________________________
AACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTG REF 6 52180080 - 52180164
TAGGTAGTTTCCTGTTGTTGGG MATURE 6 52180096 - 52180201 mmu-miR-196b -
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................TCCTGTTGTTGGGATCCACCT......................................... 29610_0_0_0_0_0_2 OTHER 2 66.67 0 0 2 66.67 21
..............................TGTTGGGATCCACCTTTCTCcCGAC............................... 8863_0_0_0_0_0_1 OTHER 1 33.33 0 0 1 33.33 20C4
---------- ---------- ----------
3 0 3
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 0 3 50.00%
OTHER 0 3 3 50.00%
---------- ---------- ----------
3 3 6
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