[BEGIN]
REFERENCE HAIRPIN
***************************************************************************************
ID : mmu-mir-1957
DESCRIPTION : mmu-mir-1957 MI0009954 Mus musculus miR-1957 stem-loop
CHROMOSOME : 4
SPAN : 118802384 - 118802449
LENGTH : 66
SEQUENCE : CTGGAAAGTAGCTCAGTGGTAGAGCATATGACCAGCATGTGCAAGGCCCTGAGTTTATCCCCAGCA
OVERHANG THRESHOLD : 40%
***************************************************************************************
TARGET
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CATEGORY : MATURE
ID : mmu-miR-1957
ACCID : MI0009954
PARENT : mmu-mir-1957
CHROMOSOME : 4
START : 118802384
STOP : 118802449
OFFSET : 14..32
SEQUENCE : CAGTGGTAGAGCATATGAC
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________
CTGGAAAGTAGCTCAGTGGTAGAGCATATGACCAGCATGTGCAAGGCCCTGAGTTTATCCCCAGCA REF 4 118802384 - 118802449
CAGTGGTAGAGCATATGAC MATURE 4 118802398 - 118802481 mmu-miR-1957 +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........TAGCTCAGTGGTAGAGCATATGACt.................................. 5812_7_0_0_0_0_14 MATURE 21 31.82 7 23.33 14 38.89 24
........TAGCTCAGTGGTAGAGCAT........................................ 33429_5_0_0_0_0_9 MATURE 14 21.21 5 16.67 9 25.00 19
........TAGCTCAGTGGTAGAGCATATGA.................................... 2409_6_0_0_0_0_5 MATURE 11 16.67 6 20.00 5 13.89 23
...........CTCAGTGGTAGAGCATtTGACCAGC............................... 42151_6_0_0_0_0_1 MATURE 7 10.61 6 20.00 1 2.78 16T8
........TAGCTCAGTGGTAGAGCATAaGA.................................... 15430_3_0_0_0_0_1 MATURE 4 6.06 3 10.00 1 2.78 20A2
........TAGCTCAGTGGTAGAGCATAaGACt.................................. 40084_1_0_0_0_0_2 MATURE 3 4.55 1 3.33 2 5.56 20A3
........TAGCTCAGTGGTAGAGCATATGACa.................................. 17868_0_0_0_0_0_2 MATURE 2 3.03 0 0.00 2 5.56 24
........TAGCTCAGgGGTAGAGCATATGA.................................... 22534_1_0_0_0_0_0 MATURE 1 1.52 1 3.33 0 0.00 8G14
........TAGCTCAGTGGTAGAGCATATG..................................... 25281_0_0_0_0_0_1 MATURE 1 1.52 0 0.00 1 2.78 22
......AGTAGCTCAGTGGTAGAGCATATt..................................... 24889_1_0_0_0_0_0 MATURE 1 1.52 1 3.33 0 0.00 23
.........AGCTCAGTGGTAGAGCATATt..................................... 4001_0_0_0_0_0_1 MATURE 1 1.52 0 0.00 1 2.78 20
---------- ---------- ----------
66 30 36
(45.45) (54.55)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 30 36 66 100.00%
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30 36 66
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