[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1955
DESCRIPTION : mmu-mir-1955 MI0009950 Mus musculus miR-1955 stem-loop
CHROMOSOME : 2
SPAN : 92032134 - 92032231
LENGTH : 98
SEQUENCE : CTGGTTTACTTACTACAAGTCCCAGGATGCACTGCAGCTTTTTCTTAACTTCAGATAAGAGCATTGCATGCTGGGACATGTAGTTGGTTTAAATAGCA
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-1955
ACCID : MI0009950
PARENT : mmu-mir-1955
CHROMOSOME : 2
START : 92032134
STOP : 92032231
OFFSET : 18..42
SEQUENCE : AGTCCCAGGATGCACTGCAGCTTTT
STRAND : +
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*** MATURE ***
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CTGGTTTACTTACTACAAGTCCCAGGATGCACTGCAGCTTTTTCTTAACTTCAGATAAGAGCATTGCATGCTGGGACATGTAGTTGGTTTAAATAGCA REF 2 92032134 - 92032231
AGTCCCAGGATGCACTGCAGCTTTT MATURE 2 92032152 - 92032273 mmu-miR-1955 +
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................AGTCCCAGGATGCACTGCAGCaTT.......................................................... 22783_1_0_0_0_0_1 MATURE 2 28.57 1 20.00 1 50.00 21A2
.................AGTCCCAGGATGCACTGCAGCTTT.......................................................... 14211_1_0_0_0_0_1 MATURE 2 28.57 1 20.00 1 50.00 24
..................GTCCCAGGATGCACTGCAGCTTT.......................................................... 39219_1_0_0_0_0_0 MATURE 1 14.29 1 20.00 0 0.00 23
.................AGTCCCAGGATGCACTGCAGCTT........................................................... 34992_1_0_0_0_0_0 MATURE 1 14.29 1 20.00 0 0.00 23
.................AGTCCCAGGATGCACTGtAGCTT........................................................... 43564_1_0_0_0_0_0 MATURE 1 14.29 1 20.00 0 0.00 17T5
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7 5 2
(71.43) (28.57)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 5 2 7 100.00%
---------- ---------- ----------
5 2 7
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