[BEGIN]

REFERENCE HAIRPIN
**********************************************************************************************************
ID                 : mmu-mir-1948
DESCRIPTION        : mmu-mir-1948 MI0009939 Mus musculus miR-1948 stem-loop
CHROMOSOME         : 18
SPAN               : 12873320 - 12873404
LENGTH             : 85
SEQUENCE           : ATTCTCACCTTACTATATGAGTATTCTGCCTAAATGTGGTGTACGGATACATTTAGGCAGAGCACTCGTACAGTAAGGTGAGAAT
OVERHANG THRESHOLD : 40%
**********************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-1948
ACCID      : MI0009939
PARENT     : mmu-mir-1948
CHROMOSOME : 18
START      : 12873320
STOP       : 12873404
OFFSET     : 52..73
SEQUENCE   : TTTAGGCAGAGCACTCGTACAG
STRAND     : +
******************************



*** MATURE ***
_____________________________________________________________________________________
ATTCTCACCTTACTATATGAGTATTCTGCCTAAATGTGGTGTACGGATACATTTAGGCAGAGCACTCGTACAGTAAGGTGAGAAT REF                  18                   12873320 - 12873404  
                                                   TTTAGGCAGAGCACTCGTACAG             MATURE               18                   12873372 - 12873477  mmu-miR-1948         +                    
_____________________________________________________________________________________

                                                                                 -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...................................................TTTAGGCAGAGCACTCGTAt...............   31538_0_0_0_0_0_1       MATURE            1       100.00            0            0            1       100.00                        19   
                                                                                                                          ----------                ----------                ----------   
                                                                                                                                   1                         0                         1                                          
                                                                                                                                                        (0.00)                  (100.00)                                       




*** OTHER ***
_____________________________________________________________________________________
ATTCTCACCTTACTATATGAGTATTCTGCCTAAATGTGGTGTACGGATACATTTAGGCAGAGCACTCGTACAGTAAGGTGAGAAT REF                  18                   12873320 - 12873404  
                                                   TTTAGGCAGAGCACTCGTACAG             MATURE               18                   12873372 - 12873477  mmu-miR-1948         +                    
_____________________________________________________________________________________

                                                                                 -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...............TATGAGTATTCTGCCTAAAgGT.................................................   25678_0_0_0_0_0_1        OTHER            1       100.00            0            0            1       100.00                      19G2   
                                                                                                                          ----------                ----------                ----------   
                                                                                                                                   1                         0                         1                                          
                                                                                                                                                        (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               0               1               1          50.00%
          OTHER               0               1               1          50.00%
                     ----------      ----------      ----------                
                              0               2               2                



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