[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************
ID : mmu-mir-1948
DESCRIPTION : mmu-mir-1948 MI0009939 Mus musculus miR-1948 stem-loop
CHROMOSOME : 18
SPAN : 12873320 - 12873404
LENGTH : 85
SEQUENCE : ATTCTCACCTTACTATATGAGTATTCTGCCTAAATGTGGTGTACGGATACATTTAGGCAGAGCACTCGTACAGTAAGGTGAGAAT
OVERHANG THRESHOLD : 40%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1948
ACCID : MI0009939
PARENT : mmu-mir-1948
CHROMOSOME : 18
START : 12873320
STOP : 12873404
OFFSET : 52..73
SEQUENCE : TTTAGGCAGAGCACTCGTACAG
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________
ATTCTCACCTTACTATATGAGTATTCTGCCTAAATGTGGTGTACGGATACATTTAGGCAGAGCACTCGTACAGTAAGGTGAGAAT REF 18 12873320 - 12873404
TTTAGGCAGAGCACTCGTACAG MATURE 18 12873372 - 12873477 mmu-miR-1948 +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................TTTAGGCAGAGCACTCGTAt............... 31538_0_0_0_0_0_1 MATURE 1 100.00 0 0 1 100.00 19
---------- ---------- ----------
1 0 1
(0.00) (100.00)
*** OTHER ***
_____________________________________________________________________________________
ATTCTCACCTTACTATATGAGTATTCTGCCTAAATGTGGTGTACGGATACATTTAGGCAGAGCACTCGTACAGTAAGGTGAGAAT REF 18 12873320 - 12873404
TTTAGGCAGAGCACTCGTACAG MATURE 18 12873372 - 12873477 mmu-miR-1948 +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............TATGAGTATTCTGCCTAAAgGT................................................. 25678_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 19G2
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 1 1 50.00%
OTHER 0 1 1 50.00%
---------- ---------- ----------
0 2 2
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