[BEGIN]
REFERENCE HAIRPIN
*****************************************************************************************************************************
ID : mmu-mir-1940
DESCRIPTION : mmu-mir-1940 MI0009929 Mus musculus miR-1940 stem-loop
CHROMOSOME : 13
SPAN : 96100535 - 96100638
LENGTH : 104
SEQUENCE : AGCCAGGATGCAGCCTGCTATGGAGGACTGAGAAGGTGGAGCAGTTCTGTACCGTGCTGCCTTCCATTGGTTAAGACCTCCAACAGTAAAGGGCTGGCCGGCCA
OVERHANG THRESHOLD : 40%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1940
ACCID : MI0009929
PARENT : mmu-mir-1940
CHROMOSOME : 13
START : 96100535
STOP : 96100638
OFFSET : 20..46
SEQUENCE : ATGGAGGACTGAGAAGGTGGAGCAGTT
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________________________________
AGCCAGGATGCAGCCTGCTATGGAGGACTGAGAAGGTGGAGCAGTTCTGTACCGTGCTGCCTTCCATTGGTTAAGACCTCCAACAGTAAAGGGCTGGCCGGCCA REF 13 96100535 - 96100638
ATGGAGGACTGAGAAGGTGGAGCAGTT MATURE 13 96100555 - 96100684 mmu-miR-1940 +
________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................TGGAGGACTGAGAAGGTGG.................................................................. 12727_0_0_0_0_0_1 MATURE 1 50.00 0 0.00 1 100.00 19
...........................CTGAGAAGGTGGAGCAGTTCTGTAa..................................................... 22377_1_0_0_0_0_0 MATURE 1 50.00 1 100.00 0 0.00 24
---------- ---------- ----------
2 1 1
(50.00) (50.00)
*** OTHER ***
________________________________________________________________________________________________________
AGCCAGGATGCAGCCTGCTATGGAGGACTGAGAAGGTGGAGCAGTTCTGTACCGTGCTGCCTTCCATTGGTTAAGACCTCCAACAGTAAAGGGCTGGCCGGCCA REF 13 96100535 - 96100638
ATGGAGGACTGAGAAGGTGGAGCAGTT MATURE 13 96100555 - 96100684 mmu-miR-1940 +
________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............................AGAAGGTGGAGCAGTTCTGTACCGT.................................................. 40923_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 25
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 1 2 66.67%
OTHER 0 1 1 33.33%
---------- ---------- ----------
1 2 3
[END]