[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-194-2
DESCRIPTION : mmu-mir-194-2 MI0000733 Mus musculus miR-194-2 stem-loop
CHROMOSOME : 19
SPAN : 6264643 - 6264728
LENGTH : 86
SEQUENCE : GTGGCTCCCACCCTCTGTAACAGCAACTCCATGTGGAAGTGCCCACTGGTTCCAGTGGGGCTGCTGTTATCTGGGGTGGCGGCTAG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-194
ACCID : MI0000733
PARENT : mmu-mir-194-2
CHROMOSOME : 19
START : 6264643
STOP : 6264728
OFFSET : 16..37
SEQUENCE : TGTAACAGCAACTCCATGTGGA
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________________________
GTGGCTCCCACCCTCTGTAACAGCAACTCCATGTGGAAGTGCCCACTGGTTCCAGTGGGGCTGCTGTTATCTGGGGTGGCGGCTAG REF 19 6264643 - 6264728
TGTAACAGCAACTCCATGTGGA MATURE 19 6264659 - 6264765 mmu-miR-194 +
______________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................GTAACAGCAACTCCATGTGGAAt................................................ 14662_1_0_0_0_0_0 MATURE 1 33.33 1 50.00 0 0.00 22
................GTAACAGCAACTCCATGaGGAAa................................................ 11444_1_0_0_0_0_0 MATURE 1 33.33 1 50.00 0 0.00 17A4
...............TGTAACAGCAACTCCATGTGGAAa................................................ 11779_0_0_0_0_0_1 MATURE 1 33.33 0 0.00 1 100.00 23
---------- ---------- ----------
3 2 1
(66.67) (33.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2 1 3 100.00%
---------- ---------- ----------
2 1 3
[END]