[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-194-1
DESCRIPTION : mmu-mir-194-1 MI0000236 Mus musculus miR-194-1 stem-loop
CHROMOSOME : 1
SPAN : 187137198 - 187137264
LENGTH : 67
SEQUENCE : ATCGGGTGTAACAGCAACTCCATGTGGACTGTGCTCGGATTCCAGTGGAGCTGCTGTTACTTCTGAT
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-194
ACCID : MI0000236
PARENT : mmu-mir-194-1
CHROMOSOME : 1
START : 187137198
STOP : 187137264
OFFSET : 7..28
SEQUENCE : TGTAACAGCAACTCCATGTGGA
STRAND : +
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*** MATURE ***
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ATCGGGTGTAACAGCAACTCCATGTGGACTGTGCTCGGATTCCAGTGGAGCTGCTGTTACTTCTGAT REF 1 187137198 - 187137264
TGTAACAGCAACTCCATGTGGA MATURE 1 187137205 - 187137292 mmu-miR-194 +
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....GGTGTAACAGCAACTCCAaGTGG......................................... 30516_2_0_0_0_0_1 MATURE 3 15.79 2 20.00 1 11.11 18A4
....GGTGTAACAGCAACTCCATaTGGA........................................ 29679_1_0_0_0_0_1 MATURE 2 10.53 1 10.00 1 11.11 19A4
....GGTGTAACAGCAACTCCATGTGG......................................... 38715_1_0_0_0_0_1 MATURE 2 10.53 1 10.00 1 11.11 23
.....GTGTAACAGCAACTCCATGTaGAt....................................... 5237_1_0_0_0_0_0 MATURE 1 5.26 1 10.00 0 0.00 20A2
....GGTGTAACAGCAACTCCAaGTGGA........................................ 19974_1_0_0_0_0_0 MATURE 1 5.26 1 10.00 0 0.00 18A5
....GGTGTAACAGCAACTCCATaTGG......................................... 34924_1_0_0_0_0_0 MATURE 1 5.26 1 10.00 0 0.00 19A3
.....GTGTAACAGCAACTCCATaTGG......................................... 3692_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 11.11 18A3
.....GTGTAACAGCAACTCCATGTGGg........................................ 30323_1_0_0_0_0_0 MATURE 1 5.26 1 10.00 0 0.00 22
....GGTGTAACAGCAACTCCATcTGG......................................... 18481_1_0_0_0_0_0 MATURE 1 5.26 1 10.00 0 0.00 19C3
.....GTGTAACAGCAACTCCAcGTGGA........................................ 37471_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 11.11 17C5
.....GTGTAACAGCAACTCCATGTGt......................................... 25480_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 11.11 21
....GGTGTAACAGCAACTCCtTGTGG......................................... 2414_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 11.11 17T5
.....GTGTAACAGCAACTCCATGTaGA........................................ 4928_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 11.11 20A2
.....GTGTAACAGCAACTCCATGTGG......................................... 8184_1_0_0_0_0_0 MATURE 1 5.26 1 10.00 0 0.00 22
.TCcGGTGTAACAGCAACTCCATGT........................................... 40057_0_0_0_0_0_1 MATURE 1 5.26 0 0.00 1 11.11 2C21
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19 10 9
(52.63) (47.37)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 10 9 19 100.00%
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10 9 19
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