[BEGIN]

REFERENCE HAIRPIN
********************************************************************************************************
ID                 : mmu-mir-1934
DESCRIPTION        : mmu-mir-1934 MI0009923 Mus musculus miR-1934 stem-loop
CHROMOSOME         : 11
SPAN               : 69476545 - 69476627
LENGTH             : 83
SEQUENCE           : CTGGGCCTTCTTTCTGGTCCCCTGCTTCGTCCTCTGTCCAGATGTTAAGAGGATGACGGTGGGGCTGGTGAGATGGCTCAGCG
OVERHANG THRESHOLD : 40%
********************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-1934
ACCID      : MI0009923
PARENT     : mmu-mir-1934
CHROMOSOME : 11
START      : 69476545
STOP       : 69476627
OFFSET     : 13..35
SEQUENCE   : TCTGGTCCCCTGCTTCGTCCTCT
STRAND     : +
******************************



*** MATURE ***
___________________________________________________________________________________
CTGGGCCTTCTTTCTGGTCCCCTGCTTCGTCCTCTGTCCAGATGTTAAGAGGATGACGGTGGGGCTGGTGAGATGGCTCAGCG REF                  11                   69476545 - 69476627  
            TCTGGTCCCCTGCTTCGTCCTCT                                                 MATURE               11                   69476558 - 69476662  mmu-miR-1934         +                    
___________________________________________________________________________________

                                                                               -SEQ-                 -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
............TCTGGTCCCCTGCTTCGTCCTCT.................................................        342_4_0_0_0_0_2       MATURE            6        85.71            4        80.00            2       100.00                        23   
............TCTGGTCCCCTGCTTCGTCCTCTa................................................      34234_1_0_0_0_0_0       MATURE            1        14.29            1        20.00            0         0.00                        23   
                                                                                                                           ----------                ----------                ----------   
                                                                                                                                    7                         5                         2                                          
                                                                                                                                                        (71.43)                   (28.57)                                       




*** OTHER ***
___________________________________________________________________________________
CTGGGCCTTCTTTCTGGTCCCCTGCTTCGTCCTCTGTCCAGATGTTAAGAGGATGACGGTGGGGCTGGTGAGATGGCTCAGCG REF                  11                   69476545 - 69476627  
            TCTGGTCCCCTGCTTCGTCCTCT                                                 MATURE               11                   69476558 - 69476662  mmu-miR-1934         +                    
___________________________________________________________________________________

                                                                               -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
................................................GAGGATGACGGTGGGGCTaGTGA.............   26772_0_0_0_0_0_1        OTHER            1       100.00            0            0            1       100.00                      18A4   
                                                                                                                        ----------                ----------                ----------   
                                                                                                                                 1                         0                         1                                          
                                                                                                                                                      (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               5               2               7          87.50%
          OTHER               0               1               1          12.50%
                     ----------      ----------      ----------                
                              5               3               8                



[END]
