[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************************************
ID : mmu-mir-192
DESCRIPTION : mmu-mir-192 MI0000551 Mus musculus miR-192 stem-loop
CHROMOSOME : 19
SPAN : 6264844 - 6264932
LENGTH : 89
SEQUENCE : CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC
OVERHANG THRESHOLD : 40%
**************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-192
ACCID : MI0000551
PARENT : mmu-mir-192
CHROMOSOME : 19
START : 6264844
STOP : 6264932
OFFSET : 14..34
SEQUENCE : CTGACCTATGAATTGACAGCC
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________
CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC REF 19 6264844 - 6264932
CTGACCTATGAATTGACAGCC MATURE 19 6264858 - 6264966 mmu-miR-192 +
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............CTGACCTATGAATTGACAGCCAt...................................................... 29813_13_0_0_0_0_12 MATURE 25 24.27 13 27.66 12 21.43 22
.............CTGACCTATGAATTGACAGCCAa...................................................... 37879_1_0_0_0_0_5 MATURE 6 5.83 1 2.13 5 8.93 22
.............CTGACCTATGAATTGACtGCCAt...................................................... 39964_3_0_0_0_0_3 MATURE 6 5.83 3 6.38 3 5.36 17T4
.........GGCgCTGACCTATGAATTGACAGCC........................................................ 8598_5_0_0_0_0_0 MATURE 5 4.85 5 10.64 0 0.00 3G21
.............CTGACCTATGAATTGACAaCCAt...................................................... 33320_0_0_0_0_0_4 MATURE 4 3.88 0 0.00 4 7.14 18A3
..............TGACCTATGAATTGACAaCCAG...................................................... 21375_1_0_0_0_0_3 MATURE 4 3.88 1 2.13 3 5.36 17A4
..............TGACCTATGAATTGACAGCCAGa..................................................... 27586_0_0_0_0_0_3 MATURE 3 2.91 0 0.00 3 5.36 22
..........GCgCTGACCTATGAATTGACAGCCt....................................................... 32626_1_0_0_0_0_2 MATURE 3 2.91 1 2.13 2 3.57 2G21
..............TGACCTATGAATTGACAGCCAt...................................................... 41342_1_0_0_0_0_2 MATURE 3 2.91 1 2.13 2 3.57 21
.............CTGACCTATGAATTGACAcCCAt...................................................... 33965_2_0_0_0_0_0 MATURE 2 1.94 2 4.26 0 0.00 18C3
..............TGACCTATGAATTGACAGCCAGTA.................................................... 27413_0_0_0_0_0_2 MATURE 2 1.94 0 0.00 2 3.57 24
.............CTGACCTATGAATTGACcGCCAt...................................................... 27431_0_0_0_0_0_2 MATURE 2 1.94 0 0.00 2 3.57 17C4
.........GGCgCTGACCTATGAATTGACAGC......................................................... 37238_1_0_0_0_0_1 MATURE 2 1.94 1 2.13 1 1.79 3G20
.........GGCgCTGACCTATGAATTGACAG.......................................................... 5775_1_0_0_0_0_1 MATURE 2 1.94 1 2.13 1 1.79 3G19
.............CTGACCTATGAATTGACAGCCAG...................................................... 40645_1_0_0_0_0_1 MATURE 2 1.94 1 2.13 1 1.79 23
.............CTGACCTATGAATTGACAtCCAt...................................................... 42665_0_0_0_0_0_2 MATURE 2 1.94 0 0.00 2 3.57 18T3
.........GGCgCTGACCTATGAATTGACAGCt........................................................ 30641_1_0_0_0_0_1 MATURE 2 1.94 1 2.13 1 1.79 3G20
..............TGACCTATGAATTGACtGCCAG...................................................... 34851_2_0_0_0_0_0 MATURE 2 1.94 2 4.26 0 0.00 16T5
...............GACCTATGAATTGACAGtCAGTt.................................................... 22907_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 17T4
..............TGACCTATGAATTGACAGCCAtTAt................................................... 15366_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 21T2
................ACCTATGAATTGACAGCCAGa..................................................... 14829_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 20
.........GGCTCTGACCTATGAATTGACAaCC........................................................ 23737_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 22A2
...............GACCTATGAATTGACAaCCAG...................................................... 3216_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 16A4
...............GACCTATGAATTGACAaCCAGT..................................................... 16044_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 16A5
.............CTGACCTATGAATTGACAaCCAG...................................................... 41561_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 18A4
.............CTGACCTATGAATTGACAaCC........................................................ 42927_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 18A2
.........GGCgCTGACCTATGAATTGACAGa......................................................... 19409_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 3G19
.............CTGACCTATGAATTGACAaCCA....................................................... 8286_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 18A3
.............CTGACCTATGAATTGACAaCCAa...................................................... 28244_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 18A3
..............TGACCTATGAATTGACAaCCAt...................................................... 37299_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 17A3
..............TGACCTATGAATTGACAGCCAGaAC................................................... 33049_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 22A2
..............TGACCTATGAATTGACAtCCA....................................................... 18030_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 17T3
..........GCgCTGACCTATGAATTGACAGCCA....................................................... 29571_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 2G22
.............CTGACCTATGAATTGACAtCCAc...................................................... 2263_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 18T3
..............TGACCTATGAATTGACAGCCAc...................................................... 32253_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 21
..............TGACCTATGAATTGACcGCCAt...................................................... 29188_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 16C4
...............GACCTATGAATTGACAGaCAGTA.................................................... 29429_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 17A5
...............GACCTATGAATTGACAGCCAt...................................................... 38047_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 20
..............TGACCTATGAATTGACAtCCAG...................................................... 2407_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 17T4
.........GGCgCTGACCTATGAATTGACAGCa........................................................ 32780_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 3G20
.............CTGACCTATGAATTGACAGCCAc...................................................... 32521_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 22
..............TGACCTATGAATTGACAaCCAGT..................................................... 24064_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 17A5
.........GGCgCTGACCTATGAATTGACAa.......................................................... 16148_0_0_0_0_0_1 MATURE 1 0.97 0 0.00 1 1.79 3G18
...............GACCTATGAATTGACAGCCAGa..................................................... 21077_1_0_0_0_0_0 MATURE 1 0.97 1 2.13 0 0.00 21
---------- ---------- ----------
103 47 56
(45.63) (54.37)
*** OTHER ***
_________________________________________________________________________________________
CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC REF 19 6264844 - 6264932
CTGACCTATGAATTGACAGCC MATURE 19 6264858 - 6264966 mmu-miR-192 +
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......................................................GGCTGCCAATTCCATAGGTCACAt............ 24169_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 25.00 23
.......................................................GCTGCCAATTCCATAGGTtACAG............ 16747_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 25.00 18T4
......................................................GGCTGCCAATTCCATAGGcCACAG............ 39465_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 25.00 18C5
........................................................CTGCCAATTCCATAGGTCgCAt............ 5859_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 25.00 18G2
......................................................GGCTGCCAATTCCATAGGcCACA............. 11552_1_0_0_0_0_0 OTHER 1 20.00 1 100.00 0 0.00 18C4
---------- ---------- ----------
5 1 4
(20.00) (80.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 47 56 103 95.37%
OTHER 1 4 5 4.63%
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48 60 108
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