[BEGIN]
REFERENCE HAIRPIN
*****************************************************************************************************
ID : mmu-mir-190b
DESCRIPTION : mmu-mir-190b MI0005478 Mus musculus miR-190b stem-loop
CHROMOSOME : 3
SPAN : 89873942 - 89874021
LENGTH : 80
SEQUENCE : TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG
OVERHANG THRESHOLD : 40%
*****************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-190b
ACCID : MI0005478
PARENT : mmu-mir-190b
CHROMOSOME : 3
START : 89873942
STOP : 89874021
OFFSET : 11..31
SEQUENCE : TGATATGTTTGATATTGGGTT
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG REF 3 89873942 - 89874021
TGATATGTTTGATATTGGGTT MATURE 3 89873953 - 89874052 mmu-miR-190b +
________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........TGTGATATGTTTGATATTGaGTTG................................................. 7548_1_0_0_0_0_0 MATURE 1 100.00 1 100.00 0 0 19A4
---------- ---------- ----------
1 1 0
(100.00) (0.00)
*** OTHER ***
________________________________________________________________________________
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG REF 3 89873942 - 89874021
TGATATGTTTGATATTGGGTT MATURE 3 89873953 - 89874052 mmu-miR-190b +
________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............................................AACTGAATGTCAAGCAcACTCT............. 43098_2_0_0_0_0_0 OTHER 2 66.67 2 66.67 0 0 16C5
...............................................ACTGAATGTCAAGCATACTCTC............ 10235_1_0_0_0_0_0 OTHER 1 33.33 1 33.33 0 0 22
---------- ---------- ----------
3 3 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 0 1 25.00%
OTHER 3 0 3 75.00%
---------- ---------- ----------
4 0 4
[END]