[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-190
DESCRIPTION : mmu-mir-190 MI0000232 Mus musculus miR-190 stem-loop
CHROMOSOME : 9
SPAN : 67084467 - 67084533
LENGTH : 67
SEQUENCE : CTGTGTGATATGTTTGATATATTAGGTTGTTATTTAATCCAACTATATATCAAGCATATTCCTACAG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-190
ACCID : MI0000232
PARENT : mmu-mir-190
CHROMOSOME : 9
START : 67084467
STOP : 67084533
OFFSET : 6..27
SEQUENCE : TGATATGTTTGATATATTAGGT
STRAND : -
******************************
*** MATURE ***
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CTGTGTGATATGTTTGATATATTAGGTTGTTATTTAATCCAACTATATATCAAGCATATTCCTACAG REF 9 67084467 - 67084533
TGATATGTTTGATATATTAGGT MATURE 9 67084473 - 67084560 mmu-miR-190 -
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....GTGATATGTTTGATATAgTAGGT......................................... 8674_0_0_0_0_0_1 MATURE 1 33.33 0 0 1 33.33 17G5
....GTGATATGTTTGATATATTAGGT......................................... 7911_0_0_0_0_0_1 MATURE 1 33.33 0 0 1 33.33 23
...TGTGATATGTTTGATATATTAGGT......................................... 39240_0_0_0_0_0_1 MATURE 1 33.33 0 0 1 33.33 24
---------- ---------- ----------
3 0 3
(0.00) (100.00)
*** OTHER ***
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CTGTGTGATATGTTTGATATATTAGGTTGTTATTTAATCCAACTATATATCAAGCATATTCCTACAG REF 9 67084467 - 67084533
TGATATGTTTGATATATTAGGT MATURE 9 67084473 - 67084560 mmu-miR-190 -
___________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................................ACTATATATCAAGCATAaTCCT..... 790_0_0_0_0_0_2 OTHER 2 50.00 0 0 2 50.00 17A4
.........................................ACTATATATCAAGCATgTTCC...... 28165_0_0_0_0_0_2 OTHER 2 50.00 0 0 2 50.00 16G4
---------- ---------- ----------
4 0 4
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 3 3 42.86%
OTHER 0 4 4 57.14%
---------- ---------- ----------
0 7 7
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