[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-187
DESCRIPTION : mmu-mir-187 MI0000229 Mus musculus miR-187 stem-loop
CHROMOSOME : 18
SPAN : 24587611 - 24587671
LENGTH : 61
SEQUENCE : TCAGGCTACAACACAGGACCCGGGCGCTGCTCTGACCCCTCGTGTCTTGTGTTGCAGCCGG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-187
ACCID : MI0000229
PARENT : mmu-mir-187
CHROMOSOME : 18
START : 24587611
STOP : 24587671
OFFSET : 40..61
SEQUENCE : TCGTGTCTTGTGTTGCAGCCGG
STRAND : -
******************************
*** MATURE ***
_____________________________________________________________
TCAGGCTACAACACAGGACCCGGGCGCTGCTCTGACCCCTCGTGTCTTGTGTTGCAGCCGG REF 18 24587611 - 24587671
TCGTGTCTTGTGTTGCAGCCGG MATURE 18 24587651 - 24587732 mmu-miR-187 -
_____________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................TCGTGTCTTGTGTTGCAaCCGa. 26466_1_0_0_0_0_4 MATURE 5 19.23 1 14.29 4 21.05 17A3
.......................................TCGTGTCTTGTGTTGCAaCCGG. 40184_1_0_0_0_0_4 MATURE 5 19.23 1 14.29 4 21.05 17A4
.......................................TCGTGTCTTGTGTTGCAGCCGc. 6180_1_0_0_0_0_1 MATURE 2 7.69 1 14.29 1 5.26 21
.......................................TCGTGTCTTGTGTTGCAtCCGG. 25664_0_0_0_0_0_2 MATURE 2 7.69 0 0.00 2 10.53 17T4
.......................................TCGTGTCTTGTGTTGCtGCCGG. 24747_2_0_0_0_0_0 MATURE 2 7.69 2 28.57 0 0.00 16T5
.......................................TCGTGTCTTGTGTTGCAGCCGa. 4712_0_0_0_0_0_2 MATURE 2 7.69 0 0.00 2 10.53 21
.......................................TCGTGTCTTGTGTTGCAGCCGt. 44005_1_0_0_0_0_1 MATURE 2 7.69 1 14.29 1 5.26 21
.......................................TCGTGTCTTGTGTTGCAaCCGt. 26272_0_0_0_0_0_1 MATURE 1 3.85 0 0.00 1 5.26 17A3
.......................................TCGTGTCTTGTGTTGCAGaCGt. 26033_0_0_0_0_0_1 MATURE 1 3.85 0 0.00 1 5.26 18A2
.......................................TCGTGTCTTGTGTTGCAcCCGG. 38051_1_0_0_0_0_0 MATURE 1 3.85 1 14.29 0 0.00 17C4
.......................................TCGTGTCTTGTGTTGCAaCCG.. 7418_0_0_0_0_0_1 MATURE 1 3.85 0 0.00 1 5.26 17A3
.......................................TCGTGTCTTGTGTTGCcGCCGa. 33166_0_0_0_0_0_1 MATURE 1 3.85 0 0.00 1 5.26 16C4
.......................................TCGTGTCTTGTGTTGCAcCCGa. 22874_0_0_0_0_0_1 MATURE 1 3.85 0 0.00 1 5.26 17C3
---------- ---------- ----------
26 7 19
(26.92) (73.08)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 7 19 26 100.00%
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7 19 26
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