[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-185
DESCRIPTION : mmu-mir-185 MI0000227 Mus musculus miR-185 stem-loop
CHROMOSOME : 16
SPAN : 18327494 - 18327558
LENGTH : 65
SEQUENCE : AGGGATTGGAGAGAAAGGCAGTTCCTGATGGTCCCCTCCCAGGGGCTGGCTTTCCTCTGGTCCTT
OVERHANG THRESHOLD : 40%
**************************************************************************************
TARGET
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CATEGORY : MATURE
ID : mmu-miR-185
ACCID : MI0000227
PARENT : mmu-mir-185
CHROMOSOME : 16
START : 18327494
STOP : 18327558
OFFSET : 7..28
SEQUENCE : TGGAGAGAAAGGCAGTTCCTGA
STRAND : -
******************************
*** MATURE ***
_________________________________________________________________
AGGGATTGGAGAGAAAGGCAGTTCCTGATGGTCCCCTCCCAGGGGCTGGCTTTCCTCTGGTCCTT REF 16 18327494 - 18327558
TGGAGAGAAAGGCAGTTCCTGA MATURE 16 18327501 - 18327586 mmu-miR-185 -
_________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......TGGAGAGAAAGGCAGTTCCTGA...................................... 41873_18_0_0_0_0_29 MATURE 47 19.34 18 17.31 29 20.86 22
......TGGAGAGAAAGGCAGTTCCTGAT..................................... 41331_19_0_0_0_0_20 MATURE 39 16.05 19 18.27 20 14.39 23
......TGGAGAGAAAGGCAGTTCCTGt...................................... 43034_8_0_0_0_0_14 MATURE 22 9.05 8 7.69 14 10.07 21
......TGGAGAGAAAGGCAGTTCCaGA...................................... 38056_3_0_0_0_0_9 MATURE 12 4.94 3 2.88 9 6.47 19A2
......TGGAGAGAAAGGCAGTTCCTGAa..................................... 35872_5_0_0_0_0_6 MATURE 11 4.53 5 4.81 6 4.32 22
......TGGAGAGAAAGGCAGTTCCaGAT..................................... 37646_5_0_0_0_0_5 MATURE 10 4.12 5 4.81 5 3.60 19A3
......TGGgGAGAAAGGCAGTTCCTGAT..................................... 33329_1_0_0_0_0_5 MATURE 6 2.47 1 0.96 5 3.60 3G19
......TGGAGAGAAAGGCAGTTCCTGc...................................... 43370_1_0_0_0_0_4 MATURE 5 2.06 1 0.96 4 2.88 21
......TGGAGAGAAAGGCAGTTCCcGAT..................................... 37545_2_0_0_0_0_3 MATURE 5 2.06 2 1.92 3 2.16 19C3
......TGGAGAGAAAGGCAGTTCCTGATa.................................... 31908_2_0_0_0_0_3 MATURE 5 2.06 2 1.92 3 2.16 23
......TGGAGAGAAAGGCAGTTCCTaAT..................................... 17924_2_0_0_0_0_2 MATURE 4 1.65 2 1.92 2 1.44 20A2
......TGGAGAGAAAGGCAGTcCCTGA...................................... 4499_2_0_0_0_0_2 MATURE 4 1.65 2 1.92 2 1.44 16C5
......TGGAGAGAAAGGCAGTTaCTGA...................................... 31964_1_0_0_0_0_3 MATURE 4 1.65 1 0.96 3 2.16 17A4
......TGGAGAGAAAGGCAGTTCtTGA...................................... 36467_2_0_0_0_0_2 MATURE 4 1.65 2 1.92 2 1.44 18T3
......TGGAGAGAAAGGCAGTTaCTGAT..................................... 11357_2_0_0_0_0_2 MATURE 4 1.65 2 1.92 2 1.44 17A5
......TGGAGAGAAAGGCAGTTCCTGATt.................................... 5570_2_0_0_0_0_2 MATURE 4 1.65 2 1.92 2 1.44 23
......TGGAGAGAAAGGCAGTTCCTGAg..................................... 23527_2_0_0_0_0_2 MATURE 4 1.65 2 1.92 2 1.44 22
......TGGAGAGAAAGGCAGTgCCTGA...................................... 33189_2_0_0_0_0_2 MATURE 4 1.65 2 1.92 2 1.44 16G5
......TGGAGAGAAAGGCAGTTCCcGA...................................... 39627_1_0_0_0_0_2 MATURE 3 1.23 1 0.96 2 1.44 19C2
......TGGAGAGAAAGGCAGTTtCTGt...................................... 22127_2_0_0_0_0_1 MATURE 3 1.23 2 1.92 1 0.72 17T3
......TGGgGAGAAAGGCAGTTCCTGAc..................................... 37582_1_0_0_0_0_2 MATURE 3 1.23 1 0.96 2 1.44 3G18
......TGGAGAGAAAGGCAGTTtCTGAT..................................... 10336_3_0_0_0_0_0 MATURE 3 1.23 3 2.88 0 0.00 17T5
......TGGgGAGAAAGGCAGTTCCTGAa..................................... 40933_0_0_0_0_0_3 MATURE 3 1.23 0 0.00 3 2.16 3G18
......TGGAGAGAAAGGCAGTTCCgGA...................................... 20042_0_0_0_0_0_2 MATURE 2 0.82 0 0.00 2 1.44 19G2
......TGGAGAGAAAGGCAGTTCaTGAa..................................... 31049_2_0_0_0_0_0 MATURE 2 0.82 2 1.92 0 0.00 18A3
......TGGAGAGAAAGGCAGTTCaTGAT..................................... 12979_2_0_0_0_0_0 MATURE 2 0.82 2 1.92 0 0.00 18A4
.......GGAGAGAAAGGCAGTTCCTG....................................... 31949_0_0_0_0_0_2 MATURE 2 0.82 0 0.00 2 1.44 20
.......GGAGAGAAAGGCAGTTCCTGAa..................................... 14642_2_0_0_0_0_0 MATURE 2 0.82 2 1.92 0 0.00 21
......TGGAGAGAAAGGCAGTTtCTGA...................................... 1929_0_0_0_0_0_2 MATURE 2 0.82 0 0.00 2 1.44 17T4
......TGGAGAGAAAGGCAGTTCCTGAc..................................... 31512_0_0_0_0_0_2 MATURE 2 0.82 0 0.00 2 1.44 22
......TGGAGAGAAAGGCAGTTCaTGt...................................... 11262_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 18A2
.........AGAGAAAGGCAGTTCCTGAa..................................... 29201_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 19
......TGGAGAGAAAGGCAGTTCaTGA...................................... 40406_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 18A3
......TGGAGAGAAAGGCAGTTCtTGAa..................................... 6032_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 18T3
.....TTGGAGAGAAAGGCAGTTCCTGAc..................................... 17472_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 23
......TGGAGAGAAAGGCAGTTCCTGATG.................................... 30817_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 24
.......GGAGAGAAAGGCAGTTCCTGt...................................... 5945_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 20
......TGGAGAGAAAGGCAGTTCCTcAT..................................... 32435_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 20C2
........GAGAGAAAGGCAGTTCCTGAT..................................... 43818_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 21
.......GGAGAGAAAGGCAGTTCgTGATt.................................... 34155_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 17G4
...GAgTGGAGAGAAAGGCAGTTCCTGt...................................... 35659_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 2G21
......TGGAGAGAAAGGCAGTTtCTGAg..................................... 10903_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 17T4
......TGGAGAGAAAGGCAGTTCCTGg...................................... 29050_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 21
.......GGAGAGAAAGGCAGTTCCaGAT..................................... 43970_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 18A3
......TGGAGAGAAAGGCAGTTCgTGAT..................................... 24802_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 18G4
......TGGAGAGAAAGGCAGTTCCTGATGt................................... 27889_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 24
......TGGAGAGAAAGGCAGTcCCTGt...................................... 5841_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 16C4
......TGGAGAGAAAGGCAGTTaCTGAa..................................... 41556_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 17A4
......TGGgGAGAAAGGCAGTTCCTGAg..................................... 15246_1_0_0_0_0_0 MATURE 1 0.41 1 0.96 0 0.00 3G18
......TGGAGAGAAAGGCAGTTCCaGAa..................................... 14732_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 0.72 19A2
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243 104 139
(42.80) (57.20)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 104 139 243 100.00%
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104 139 243
[END]