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REFERENCE HAIRPIN
*******************************************************************************************
ID                 : mmu-mir-183
DESCRIPTION        : mmu-mir-183 MI0000225 Mus musculus miR-183 stem-loop
CHROMOSOME         : 6
SPAN               : 30119668 - 30119737
LENGTH             : 70
SEQUENCE           : CTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAG
OVERHANG THRESHOLD : 40%
*******************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-183
ACCID      : MI0000225
PARENT     : mmu-mir-183
CHROMOSOME : 6
START      : 30119668
STOP       : 30119737
OFFSET     : 6..27
SEQUENCE   : TATGGCACTGGTAGAATTCACT
STRAND     : -
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-183*
ACCID      : MI0000225
PARENT     : mmu-mir-183
CHROMOSOME : 6
START      : 30119668
STOP       : 30119737
OFFSET     : 45..66
SEQUENCE   : GTGAATTACCGAAGGGCCATAA
STRAND     : -
******************************



*** MATURE ***
______________________________________________________________________
CTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAG REF                  6                    30119668 - 30119737  
     TATGGCACTGGTAGAATTCACT                                            MATURE               6                    30119674 - 30119764  mmu-miR-183          -                    
                                            GTGAATTACCGAAGGGCCATAA     MATURESTAR           6                    30119713 - 30119803  mmu-miR-183*         -                    
______________________________________________________________________

                                                                  -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
....GTATGGCACTGGTAGAATTCACTG...........................................   27184_1_0_0_0_0_1       MATURE            2        28.57            1        25.00            1        33.33                        24   
....GTATGGCACTGGTAGAATTCACc............................................    6323_1_0_0_0_0_0       MATURE            1        14.29            1        25.00            0         0.00                        22   
....GTATGGCACTGGTAGAATTtACT............................................   36656_1_0_0_0_0_0       MATURE            1        14.29            1        25.00            0         0.00                      19T3   
......ATGGCACTGGTAGAATTCACTt...........................................   21495_0_0_0_0_0_1       MATURE            1        14.29            0         0.00            1        33.33                        21   
....GTATGGCACTGGTAGAATTCAC.............................................   12057_1_0_0_0_0_0       MATURE            1        14.29            1        25.00            0         0.00                        22   
....GTATGGCACTGGTAGAATTCACaGT..........................................   29032_0_0_0_0_0_1       MATURE            1        14.29            0         0.00            1        33.33                      22A2   
                                                                                                           ----------                ----------                ----------   
                                                                                                                    7                         4                         3                                          
                                                                                                                                        (57.14)                   (42.86)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               4               3               7         100.00%
                     ----------      ----------      ----------                
                              4               3               7                



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