[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************
ID : mmu-mir-183
DESCRIPTION : mmu-mir-183 MI0000225 Mus musculus miR-183 stem-loop
CHROMOSOME : 6
SPAN : 30119668 - 30119737
LENGTH : 70
SEQUENCE : CTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAG
OVERHANG THRESHOLD : 40%
*******************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-183
ACCID : MI0000225
PARENT : mmu-mir-183
CHROMOSOME : 6
START : 30119668
STOP : 30119737
OFFSET : 6..27
SEQUENCE : TATGGCACTGGTAGAATTCACT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-183*
ACCID : MI0000225
PARENT : mmu-mir-183
CHROMOSOME : 6
START : 30119668
STOP : 30119737
OFFSET : 45..66
SEQUENCE : GTGAATTACCGAAGGGCCATAA
STRAND : -
******************************
*** MATURE ***
______________________________________________________________________
CTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAG REF 6 30119668 - 30119737
TATGGCACTGGTAGAATTCACT MATURE 6 30119674 - 30119764 mmu-miR-183 -
GTGAATTACCGAAGGGCCATAA MATURESTAR 6 30119713 - 30119803 mmu-miR-183* -
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....GTATGGCACTGGTAGAATTCACTG........................................... 27184_1_0_0_0_0_1 MATURE 2 28.57 1 25.00 1 33.33 24
....GTATGGCACTGGTAGAATTCACc............................................ 6323_1_0_0_0_0_0 MATURE 1 14.29 1 25.00 0 0.00 22
....GTATGGCACTGGTAGAATTtACT............................................ 36656_1_0_0_0_0_0 MATURE 1 14.29 1 25.00 0 0.00 19T3
......ATGGCACTGGTAGAATTCACTt........................................... 21495_0_0_0_0_0_1 MATURE 1 14.29 0 0.00 1 33.33 21
....GTATGGCACTGGTAGAATTCAC............................................. 12057_1_0_0_0_0_0 MATURE 1 14.29 1 25.00 0 0.00 22
....GTATGGCACTGGTAGAATTCACaGT.......................................... 29032_0_0_0_0_0_1 MATURE 1 14.29 0 0.00 1 33.33 22A2
---------- ---------- ----------
7 4 3
(57.14) (42.86)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 4 3 7 100.00%
---------- ---------- ----------
4 3 7
[END]