[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-182
DESCRIPTION : mmu-mir-182 MI0000224 Mus musculus miR-182 stem-loop
CHROMOSOME : 6
SPAN : 30115918 - 30115992
LENGTH : 75
SEQUENCE : ACCATTTTTGGCAATGGTAGAACTCACACCGGTAAGGTAATGGGACCCGGTGGTTCTAGACTTGCCAACTATGGT
OVERHANG THRESHOLD : 40%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-182
ACCID : MI0000224
PARENT : mmu-mir-182
CHROMOSOME : 6
START : 30115918
STOP : 30115992
OFFSET : 7..31
SEQUENCE : TTTGGCAATGGTAGAACTCACACCG
STRAND : -
******************************
*** MATURE ***
___________________________________________________________________________
ACCATTTTTGGCAATGGTAGAACTCACACCGGTAAGGTAATGGGACCCGGTGGTTCTAGACTTGCCAACTATGGT REF 6 30115918 - 30115992
TTTGGCAATGGTAGAACTCACACCG MATURE 6 30115925 - 30116023 mmu-miR-182 -
___________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......TTTGGCAATGGTAGAACTtACACC.............................................. 22589_0_0_0_0_0_2 MATURE 2 14.29 0 0.00 2 16.67 18T5
............AATGGTAGAACTCACACCG............................................. 42704_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 19
.......TTGGCAATGGTAGAACTCACAgCGt............................................ 36662_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 21G2
.......TTGGCAATGGTAGAACTCACACa.............................................. 7620_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 22
.......TTGGCAATGGTAGAACTCACAC............................................... 26268_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 22
.......TTGGCAATGGTAGAACTCACACCGa............................................ 25336_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 24
.......TTGGCAATGGTAGAACTCACACCG............................................. 12241_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 24
......TTTGGCAATGGTAGAACTCACgCC.............................................. 28217_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 21G2
.......TTGGCAATGGTAGAACTCAaACCGt............................................ 17496_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 19A4
.......TTGGCAATGGTAGAACcCACAC............................................... 32318_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 16C5
.......TTGGCAATGGTAGAACTaACAC............................................... 38667_1_0_0_0_0_0 MATURE 1 7.14 1 50.00 0 0.00 17A4
......TTTGGCAATGGTAGAACTCACACa.............................................. 9447_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 8.33 23
...ATTgTTGGCAATGGTAGAACTCACA................................................ 17024_1_0_0_0_0_0 MATURE 1 7.14 1 50.00 0 0.00 3G21
---------- ---------- ----------
14 2 12
(14.29) (85.71)
*** OTHER ***
___________________________________________________________________________
ACCATTTTTGGCAATGGTAGAACTCACACCGGTAAGGTAATGGGACCCGGTGGTTCTAGACTTGCCAACTATGGT REF 6 30115918 - 30115992
TTTGGCAATGGTAGAACTCACACCG MATURE 6 30115925 - 30116023 mmu-miR-182 -
___________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............................GGTAAGGTAATGGGACCCGG.......................... 34822_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 20
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2 12 14 93.33%
OTHER 0 1 1 6.67%
---------- ---------- ----------
2 13 15
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