[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************
ID : mmu-mir-181d
DESCRIPTION : mmu-mir-181d MI0005450 Mus musculus miR-181d stem-loop
CHROMOSOME : 8
SPAN : 86702615 - 86702686
LENGTH : 72
SEQUENCE : ACAATTAACATTCATTGTTGTCGGTGGGTTGTGAGGAGGCAGCCAGACCCACCGGGGGATGAATGTCACTGT
OVERHANG THRESHOLD : 40%
*********************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-181d
ACCID : MI0005450
PARENT : mmu-mir-181d
CHROMOSOME : 8
START : 86702615
STOP : 86702686
OFFSET : 7..29
SEQUENCE : AACATTCATTGTTGTCGGTGGGT
STRAND : -
******************************
*** MATURE ***
________________________________________________________________________
ACAATTAACATTCATTGTTGTCGGTGGGTTGTGAGGAGGCAGCCAGACCCACCGGGGGATGAATGTCACTGT REF 8 86702615 - 86702686
AACATTCATTGTTGTCGGTGGGT MATURE 8 86702622 - 86702715 mmu-miR-181d -
________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......AACATTCATTGTTGTCGGTGGGTT........................................... 8112_3_0_0_0_0_8 MATURE 11 16.42 3 16.67 8 16.33 24
......AACATTCATTGTTGTCGGTaGGTT........................................... 9596_0_0_0_0_0_7 MATURE 7 10.45 0 0.00 7 14.29 19A4
......AACATTCATTGTTGTCGGaGGGTT........................................... 6489_1_0_0_0_0_4 MATURE 5 7.46 1 5.56 4 8.16 18A5
......AACATTCATTGTTGTCGGTGGGT............................................ 23829_2_0_0_0_0_2 MATURE 4 5.97 2 11.11 2 4.08 23
......AACATTCATTGTTGTCGGTGGGTa........................................... 29972_1_0_0_0_0_3 MATURE 4 5.97 1 5.56 3 6.12 23
......AACATTCATTGTTGTCGGTaGGT............................................ 21987_3_0_0_0_0_0 MATURE 3 4.48 3 16.67 0 0.00 19A3
......AACATTCATTGTTGTCGGTGaGTT........................................... 7270_1_0_0_0_0_2 MATURE 3 4.48 1 5.56 2 4.08 20A3
.......ACATTCATTGTTGTCGGTGaGTT........................................... 17456_0_0_0_0_0_2 MATURE 2 2.99 0 0.00 2 4.08 19A3
......AACATTCATTGTTGTCGGTGGaTT........................................... 31628_0_0_0_0_0_2 MATURE 2 2.99 0 0.00 2 4.08 21A2
......AACATTCATTGTTGTCGGTGGtTT........................................... 17168_1_0_0_0_0_1 MATURE 2 2.99 1 5.56 1 2.04 21T2
......AACATTCATTGTTGTCGGTGGa............................................. 43582_0_0_0_0_0_2 MATURE 2 2.99 0 0.00 2 4.08 21
......AACATTCATTGTTGTCGGTaGG............................................. 39841_0_0_0_0_0_2 MATURE 2 2.99 0 0.00 2 4.08 19A2
......AACATTCATTGTTGTCGGTaGGc............................................ 34058_1_0_0_0_0_0 MATURE 1 1.49 1 5.56 0 0.00 19A2
......AACATTCATTGTTGTCGGTaGGTTt.......................................... 30495_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 19A4
.......ACATTCATTGTTGTCGGaGGGT............................................ 15131_1_0_0_0_0_0 MATURE 1 1.49 1 5.56 0 0.00 17A4
......AACATTCATTGTTGTCGGTGGt............................................. 13226_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 21
..AATgAACATTCATTGTTGTCGGTGa.............................................. 30728_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 3G20
......AACATTCATTGTTGTCGGTGaGTTt.......................................... 18693_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 20A3
......AACATTCATTGTTGTCGtTGGGT............................................ 18721_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 17T5
......AACATTCATTGTTGTCGGTGtGTc........................................... 11604_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 20T2
......AACATTCATTGTTGTCGGTcGGTTt.......................................... 8960_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 19C4
......AACATTCATTGTTGTCGGTGtGTTt.......................................... 24229_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 20T3
......AACATTCATTGTTGTCGGaGGGTa........................................... 38825_1_0_0_0_0_0 MATURE 1 1.49 1 5.56 0 0.00 18A4
......AACATTCATTGTTGTCGGTGa.............................................. 24093_1_0_0_0_0_0 MATURE 1 1.49 1 5.56 0 0.00 20
......AACATTCATTGTTGTCGGTGaGT............................................ 39739_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 20A2
......AACATTCATTGTTGTCGGTcGGa............................................ 28727_1_0_0_0_0_0 MATURE 1 1.49 1 5.56 0 0.00 19C2
.......ACATTCATTGTTGTCGGTGaGTTGT......................................... 21202_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 19A5
......AACATTCATTGTTGTCtGTGG.............................................. 8592_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 16T4
......AACATTCATTGTTGTCGGTGGGTc........................................... 22199_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 23
.......ACATTCATTGTTGTCGGTGaGTTt.......................................... 16582_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 19A3
.......ACATTCATTGTTGTCGcTGGGT............................................ 123_1_0_0_0_0_0 MATURE 1 1.49 1 5.56 0 0.00 16C5
......AACATTCATTGTTGTCGGTcGGTT........................................... 28315_0_0_0_0_0_1 MATURE 1 1.49 0 0.00 1 2.04 19C4
---------- ---------- ----------
67 18 49
(26.87) (73.13)
*** OTHER ***
________________________________________________________________________
ACAATTAACATTCATTGTTGTCGGTGGGTTGTGAGGAGGCAGCCAGACCCACCGGGGGATGAATGTCACTGT REF 8 86702615 - 86702686
AACATTCATTGTTGTCGGTGGGT MATURE 8 86702622 - 86702715 mmu-miR-181d -
________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................................AGCCAGACCCACCGGGGGATGAAT......... 37429_0_0_0_0_0_2 OTHER 2 100.00 0 0 2 100.00 24
---------- ---------- ----------
2 0 2
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 18 49 67 97.10%
OTHER 0 2 2 2.90%
---------- ---------- ----------
18 51 69
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