[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-181b-2
DESCRIPTION : mmu-mir-181b-2 MI0000823 Mus musculus miR-181b-2 stem-loop
CHROMOSOME : 2
SPAN : 38709350 - 38709438
LENGTH : 89
SEQUENCE : TTGATGGCTGCACTCAACATTCATTGCTGTCGGTGGGTTTGAATGTCAACCAACTCACTGATCAATGAATGCAAACTGCGGGCCAAAAA
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-181b
ACCID : MI0000823
PARENT : mmu-mir-181b-2
CHROMOSOME : 2
START : 38709350
STOP : 38709438
OFFSET : 16..38
SEQUENCE : AACATTCATTGCTGTCGGTGGGT
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________
TTGATGGCTGCACTCAACATTCATTGCTGTCGGTGGGTTTGAATGTCAACCAACTCACTGATCAATGAATGCAAACTGCGGGCCAAAAA REF 2 38709350 - 38709438
AACATTCATTGCTGTCGGTGGGT MATURE 2 38709366 - 38709476 mmu-miR-181b +
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............AACATTCATTGCTGTCGGTGGGTT................................................... 2091_3_0_0_0_0_8 MATURE 11 14.47 3 8.33 8 20.00 24
...............AACATTCATTGCTGTCGGTGGaTT................................................... 20096_5_0_0_0_0_4 MATURE 9 11.84 5 13.89 4 10.00 21A2
...............AACATTCATTGCTGTCGGTaGGTT................................................... 22854_1_0_0_0_0_4 MATURE 5 6.58 1 2.78 4 10.00 19A4
...............AACATTCATTGCTGTCGGTaGGT.................................................... 4058_2_0_0_0_0_2 MATURE 4 5.26 2 5.56 2 5.00 19A3
...............AACATTCATTGCTGTCGGTGaGTT................................................... 43840_0_0_0_0_0_4 MATURE 4 5.26 0 0.00 4 10.00 20A3
................ACATTCATTGCTGTCGGTGGaTT................................................... 36850_1_0_0_0_0_2 MATURE 3 3.95 1 2.78 2 5.00 20A2
...............AACATTCATTGCTGTCGGTGGGT.................................................... 6918_2_0_0_0_0_1 MATURE 3 3.95 2 5.56 1 2.50 23
...............AACATTCATTGCTGTCGGTGGGTa................................................... 31658_0_0_0_0_0_3 MATURE 3 3.95 0 0.00 3 7.50 23
...............AACATTCATTGCTGTCGaTGGGT.................................................... 22601_3_0_0_0_0_0 MATURE 3 3.95 3 8.33 0 0.00 17A5
...............AACATTCATTGCTGTCGGTGaGTTT.................................................. 24279_1_0_0_0_0_1 MATURE 2 2.63 1 2.78 1 2.50 20A4
...............AACATTCATTGCTGTCGGTGcGT.................................................... 39349_1_0_0_0_0_1 MATURE 2 2.63 1 2.78 1 2.50 20C2
...............AACATTCATTGCTGTCGGTGaGT.................................................... 31864_2_0_0_0_0_0 MATURE 2 2.63 2 5.56 0 0.00 20A2
...............AACATTCATTGCTGTCGGTGaGTTa.................................................. 27406_1_0_0_0_0_1 MATURE 2 2.63 1 2.78 1 2.50 20A3
................ACATTCATTGCTGTCGGTGaGT.................................................... 39845_1_0_0_0_0_1 MATURE 2 2.63 1 2.78 1 2.50 19A2
.................CATTCATTGCTGTCGGTGaGTTTGt................................................ 43693_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 18A5
...............AACATTCATTGCTGTCGGTtGGT.................................................... 28144_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 19T3
...............AACATTCATTGCTGTtGGTGG...................................................... 7016_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 15T5
...............AACATTCATTGCTGTCGGTGGGTTT.................................................. 24895_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 25
...............AACATTCATTGCTGTCGGTaGGTTT.................................................. 33473_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 19A5
...............AACATTCATTGCTGTCGGTGtGTT................................................... 43372_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 20T3
...............AACATTCATTGCTGTCGaTGG...................................................... 39648_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 17A3
...............AACATTCATTGCTGTCGcTGGGT.................................................... 37839_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 17C5
...............AACATTCATTGCTGTCGGTcGGT.................................................... 33286_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 19C3
.................CATTCATTGCTGTCGGTGGaTTT.................................................. 15632_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 19A3
................ACATTCATTGCTGTCGGTGGGaTT.................................................. 10568_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 21A2
...............AACATTCATTGCTGTCGGTGGGTc................................................... 13331_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 23
...............AACATTCATTGCTGTCtGTGGG..................................................... 26262_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 16T5
................ACATTCATTGCTGTCGGTGGaTTTa................................................. 35850_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 20A3
................ACATTCATTGCTGTCGGTGaGTTT.................................................. 41161_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 19A4
...............AACATTCATTGCTGTCGtTGGGT.................................................... 13713_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 17T5
...............AACATTCATTGCTGTCGGTGGaTTT.................................................. 41117_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 21A3
...............AACATTCATTGCTGTCGGaGGGTT................................................... 9056_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 18A5
...............AACATTCATTGCTGTaGGTGG...................................................... 26944_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 15A5
.................CATTCATTGCTGTCGGTGGGTTTGt................................................ 34961_1_0_0_0_0_0 MATURE 1 1.32 1 2.78 0 0.00 24
................ACATTCATTGCTGTCGGTGaGTTTt................................................. 9691_0_0_0_0_0_1 MATURE 1 1.32 0 0.00 1 2.50 19A4
---------- ---------- ----------
76 36 40
(47.37) (52.63)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 36 40 76 100.00%
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36 40 76
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