[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************
ID : mmu-mir-152
DESCRIPTION : mmu-mir-152 MI0000174 Mus musculus miR-152 stem-loop
CHROMOSOME : 11
SPAN : 96711707 - 96711779
LENGTH : 73
SEQUENCE : CCGGGCCTAGGTTCTGTGATACACTCCGACTCGGGCTCTGGAGCAGTCAGTGCATGACAGAACTTGGGCCCGG
OVERHANG THRESHOLD : 40%
**********************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-152
ACCID : MI0000174
PARENT : mmu-mir-152
CHROMOSOME : 11
START : 96711707
STOP : 96711779
OFFSET : 47..67
SEQUENCE : TCAGTGCATGACAGAACTTGG
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________
CCGGGCCTAGGTTCTGTGATACACTCCGACTCGGGCTCTGGAGCAGTCAGTGCATGACAGAACTTGGGCCCGG REF 11 96711707 - 96711779
TCAGTGCATGACAGAACTTGG MATURE 11 96711754 - 96711846 mmu-miR-152 +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................GTCAGTGCATGACAGAACaTGt....... 29198_1_0_0_0_0_1 MATURE 2 18.18 1 16.67 1 20.00 18A2
.............................................GTCAGTGCATGACAGAACaTGGa...... 19846_1_0_0_0_0_0 MATURE 1 9.09 1 16.67 0 0.00 18A3
............................................AGTCAGTGCATGgCAGAACTTGGc...... 10241_0_0_0_0_0_1 MATURE 1 9.09 0 0.00 1 20.00 12G10
.............................................GTCAGTGCATGACAGAACTT......... 38244_1_0_0_0_0_0 MATURE 1 9.09 1 16.67 0 0.00 20
.............................................GTCAGTGCATGACAGAACgTGa....... 39879_1_0_0_0_0_0 MATURE 1 9.09 1 16.67 0 0.00 18G2
.............................................GTCAGTGCATGACAGAACcTGa....... 19920_0_0_0_0_0_1 MATURE 1 9.09 0 0.00 1 20.00 18C2
.............................................GTCAGTGCATGACAGAACcTGGGt..... 11765_1_0_0_0_0_0 MATURE 1 9.09 1 16.67 0 0.00 18C4
.............................................GTCAGTGCATGACAGAtCTTGt....... 43514_0_0_0_0_0_1 MATURE 1 9.09 0 0.00 1 20.00 16T4
.............................................GTCAGTGCATGACAGAACTTGG....... 43474_1_0_0_0_0_0 MATURE 1 9.09 1 16.67 0 0.00 22
............................................AGTCAGTGCATGACAGAACTaGG....... 37092_0_0_0_0_0_1 MATURE 1 9.09 0 0.00 1 20.00 20A2
---------- ---------- ----------
11 6 5
(54.55) (45.45)
*** OTHER ***
_________________________________________________________________________
CCGGGCCTAGGTTCTGTGATACACTCCGACTCGGGCTCTGGAGCAGTCAGTGCATGACAGAACTTGGGCCCGG REF 11 96711707 - 96711779
TCAGTGCATGACAGAACTTGG MATURE 11 96711754 - 96711846 mmu-miR-152 +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........AGGTTCTGTGATACACTCCGAC............................................ 28883_1_0_0_0_0_0 OTHER 1 20.00 1 50.00 0 0.00 22
........AGGTTCTGTGATgCACTCCGACT........................................... 4810_1_0_0_0_0_0 OTHER 1 20.00 1 50.00 0 0.00 12G10
........AGGTTCTGTGATACACTCCaACT........................................... 8247_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 33.33 19A3
........AGGTTCTGTGATACACTCCGACT........................................... 27227_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 33.33 23
........AGGTTCTGTGATACAtTCCGA............................................. 9087_0_0_0_0_0_1 OTHER 1 20.00 0 0.00 1 33.33 15T5
---------- ---------- ----------
5 2 3
(40.00) (60.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 6 5 11 68.75%
OTHER 2 3 5 31.25%
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8 8 16
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