[BEGIN]
REFERENCE HAIRPIN
*****************************************************************************************
ID : mmu-mir-151
DESCRIPTION : mmu-mir-151 MI0000173 Mus musculus miR-151 stem-loop
CHROMOSOME : 15
SPAN : 73085245 - 73085312
LENGTH : 68
SEQUENCE : CCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCCTCCCTACTAGACTGAGGCTCCTTGAGGACAGG
OVERHANG THRESHOLD : 40%
*****************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-151-3p
ACCID : MI0000173
PARENT : mmu-mir-151
CHROMOSOME : 15
START : 73085245
STOP : 73085312
OFFSET : 43..63
SEQUENCE : CTAGACTGAGGCTCCTTGAGG
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-151-5p
ACCID : MI0000173
PARENT : mmu-mir-151
CHROMOSOME : 15
START : 73085245
STOP : 73085312
OFFSET : 8..28
SEQUENCE : TCGAGGAGCTCACAGTCTAGT
STRAND : -
******************************
*** MATURE-3P ***
____________________________________________________________________
CCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCCTCCCTACTAGACTGAGGCTCCTTGAGGACAGG REF 15 73085245 - 73085312
CTAGACTGAGGCTCCTTGAGG MATURE-3P 15 73085288 - 73085375 mmu-miR-151-3p -
TCGAGGAGCTCACAGTCTAGT MATURE-5P 15 73085253 - 73085340 mmu-miR-151-5p -
____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................CTAGACTGAGGCTCCTTGAGGt..... 35286_1_0_0_0_0_0 MATURE-3P 1 50.00 1 50.00 0 0 21
.........................................ACTAGACTGAGGCTCCTTGAGGt..... 7789_1_0_0_0_0_0 MATURE-3P 1 50.00 1 50.00 0 0 22
---------- ---------- ----------
2 2 0
(100.00) (0.00)
*** MATURE-5P ***
____________________________________________________________________
CCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCCTCCCTACTAGACTGAGGCTCCTTGAGGACAGG REF 15 73085245 - 73085312
CTAGACTGAGGCTCCTTGAGG MATURE-3P 15 73085288 - 73085375 mmu-miR-151-3p -
TCGAGGAGCTCACAGTCTAGT MATURE-5P 15 73085253 - 73085340 mmu-miR-151-5p -
____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......TCGAGGAGCTCACAGTCTAGTA........................................ 12605_3_0_0_0_0_1 MATURE-5P 4 18.18 3 20.00 1 14.29 22
.......TCGAGGAGCTCACAGTCTAGT......................................... 29098_3_0_0_0_0_1 MATURE-5P 4 18.18 3 20.00 1 14.29 21
.......TCGAGGAGCTCACAGTCTAGTAa....................................... 16394_0_0_0_0_0_2 MATURE-5P 2 9.09 0 0.00 2 28.57 22
.......TCGAGGAGCTCACAGTCTAG.......................................... 104_0_0_0_0_0_2 MATURE-5P 2 9.09 0 0.00 2 28.57 20
.......TCGAGGAGCTCACAGaCTAGT......................................... 28393_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 15A5
.......TCGAGGAGCTCACAGTCTAaTA........................................ 39436_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 19A2
.......TCGAGGAGCTCACAGTCTAGTAT....................................... 38880_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 23
........CGAGGAGCTCACAGTCTAG.......................................... 29434_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 19
.......TCGAGGAGCTCACAGTCgAGTAT....................................... 12568_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 17G5
.......TCGAGGAGCTCACAGTCcAGT......................................... 36601_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 17C3
.......TCGAGGAGCTCACAGTtTAGTAa....................................... 40771_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 16T5
.......TCGAGGAGCTCACAGTCaAGTAa....................................... 20485_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 17A4
.......TCGAGGAGCTCACAGTCgAGTAa....................................... 39279_0_0_0_0_0_1 MATURE-5P 1 4.55 0 0.00 1 14.29 17G4
.......TCGAGGAGCTCACAGTCTAt.......................................... 33105_1_0_0_0_0_0 MATURE-5P 1 4.55 1 6.67 0 0.00 19
---------- ---------- ----------
22 15 7
(68.18) (31.82)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 2 0 2 8.33%
MATURE-5P 15 7 22 91.67%
---------- ---------- ----------
17 7 24
[END]