[BEGIN]

REFERENCE HAIRPIN
**********************************************************************************************************************
ID                 : mmu-mir-148b
DESCRIPTION        : mmu-mir-148b MI0000617 Mus musculus miR-148b stem-loop
CHROMOSOME         : 15
SPAN               : 103115556 - 103115652
LENGTH             : 97
SEQUENCE           : CAGGCACCCTTAGCATTTGAGGTGAAGTTCTGTTATACACTCAGGCTGTGGCTCTGAAAGTCAGTGCATCACAGAACTTTGTCTCGAAAGCTTTCTA
OVERHANG THRESHOLD : 40%
**********************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-148b
ACCID      : MI0000617
PARENT     : mmu-mir-148b
CHROMOSOME : 15
START      : 103115556
STOP       : 103115652
OFFSET     : 61..82
SEQUENCE   : TCAGTGCATCACAGAACTTTGT
STRAND     : +
******************************



*** MATURE ***
_________________________________________________________________________________________________
CAGGCACCCTTAGCATTTGAGGTGAAGTTCTGTTATACACTCAGGCTGTGGCTCTGAAAGTCAGTGCATCACAGAACTTTGTCTCGAAAGCTTTCTA REF                  15                   103115556 - 103115652 
                                                            TCAGTGCATCACAGAACTTTGT                MATURE               15                   103115617 - 103115734 mmu-miR-148b         +                    
_________________________________________________________________________________________________

                                                                                             -SEQ-                -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........................................................GTCAGTGCATCACAGAACTTTGT................   38756_19_0_0_0_0_25       MATURE           44        23.16           19        23.17           25        23.15                        23   
........................................................AAtGTCAGTGCATCACAGAACTTTG.................    24083_3_0_0_0_0_26       MATURE           29        15.26            3         3.66           26        24.07                      2T22   
...........................................................GTCAGTGCATCACAGAACTTTGTt...............    28262_10_0_0_0_0_7       MATURE           17         8.95           10        12.20            7         6.48                        23   
..........................................................AGTCAGTGCATCACAGAACTTTGT................     40731_8_0_0_0_0_7       MATURE           15         7.89            8         9.76            7         6.48                        24   
.......................................................GAAtGTCAGTGCATCACAGAACTTT..................     22378_2_0_0_0_0_9       MATURE           11         5.79            2         2.44            9         8.33                      3T21   
..........................................................AGTCAGTGCATCACAGAACTTTGTt...............     13129_6_0_0_0_0_4       MATURE           10         5.26            6         7.32            4         3.70                        24   
...........................................................GTCAGTGCATCACAGAACaTTGT................      6539_3_0_0_0_0_2       MATURE            5         2.63            3         3.66            2         1.85                      18A4   
...........................................................GTCAGTGCATCACAGAACgTTGT................      7025_2_0_0_0_0_2       MATURE            4         2.11            2         2.44            2         1.85                      18G4   
...........................................................GTCAGTGCATCACAGAACTTcGTt...............     18405_0_0_0_0_0_3       MATURE            3         1.58            0         0.00            3         2.78                      20C2   
...........................................................GTCAGTGCATCACAGAACTTaGT................     15234_2_0_0_0_0_1       MATURE            3         1.58            2         2.44            1         0.93                      20A2   
...........................................................GTCAGTGCATCACAGAAgTTTGT................     28458_1_0_0_0_0_2       MATURE            3         1.58            1         1.22            2         1.85                      17G5   
..........................................................AGTCAGTGCATCACAGAACTcTGT................     21740_3_0_0_0_0_0       MATURE            3         1.58            3         3.66            0         0.00                      20C3   
...........................................................GTCAGTGCATCACAGAACTTTGTCT..............     10260_1_0_0_0_0_2       MATURE            3         1.58            1         1.22            2         1.85                        25   
...........................................................GTCAGTGCATCACAGAACaTTGTt...............       692_0_0_0_0_0_3       MATURE            3         1.58            0         0.00            3         2.78                      18A4   
...........................................................GTCAGTGCATCACAGAAaTTTGT................     40918_2_0_0_0_0_0       MATURE            2         1.05            2         2.44            0         0.00                      17A5   
...........................................................GTCAGTGCATCACAGAACgTTGTt...............      7204_2_0_0_0_0_0       MATURE            2         1.05            2         2.44            0         0.00                      18G4   
...........................................................GTCAGTGCATCACAGAACTaTGT................     39721_1_0_0_0_0_1       MATURE            2         1.05            1         1.22            1         0.93                      19A3   
..........................................................AGTCAGTGCATCACAGAACcTTGT................      7567_2_0_0_0_0_0       MATURE            2         1.05            2         2.44            0         0.00                      19C4   
..........................................................AGTCAGTGCATCACAGAACTTaGT................     40130_0_0_0_0_0_2       MATURE            2         1.05            0         0.00            2         1.85                      21A2   
..............................................................AGTGCATCACAGAACTTTGT................     39191_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                        20   
...........................................................GTCAGTGCATCACAGAACcTTGTC...............      8178_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      18C5   
.......................................................GAAtGTCAGTGCATCACAGAACTT...................     10217_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      3T20   
.............................................................CAGTGCATCACAGAACTTTGTaTC.............     20298_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      21A2   
.......................................................GAAtGTCAGTGCATCACAGAAC.....................      9621_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      3T18   
...........................................................GTCAGTGtATCACAGAACTTTGTt...............     12617_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      7T15   
...........................................................GTCAGTGCATCACAGAACTaTGTt...............     22420_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      19A3   
...........................................................GTCAGTGCATCACAGAACTTTGa................     18655_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                        22   
...........................................................GTCAGTGCATCACAGAAtTTTGT................       382_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      17T5   
...........................................................GTCAGTGCATCACAGAACTTcGT................     21027_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      20C2   
..........................................................AGTCAGTGCATCACAGAACTcTGTt...............     22311_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      20C3   
..........................................................AGTCAGTGCATCACAGAAgTTTGT................      1906_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      18G5   
...........................................................GTCAGTGCATCACAGAACTTTGTCa..............     17916_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                        24   
...........................................................GTCAGTGCATCACAGAACTgTGT................     36835_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      19G3   
..........................................................AGTCAGTGCATCACAGAACTaTGT................     21485_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      20A3   
...........................................................GTCAGTGCATCACAGAACTTTGaCT..............     35258_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      22A2   
..........................................................AGTCAGTGCATCACAGAACTTTGTa...............     34759_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                        24   
.......................................................GAAtGTCAGTGCATCACAGAACTTa..................      7398_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      3T20   
..........................................................AGTCAGTGCATCACAGAACaTTGT................     33273_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      19A4   
...........................................................GTCAGTGCATCACAGAACTTTGTC...............     24858_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                        24   
...........................................................GTCAGTGCATCACAGAACTTaGTt...............     19687_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      20A2   
...........................................................GTCAGTGCATCACAGAACTaTGTCT..............     22254_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      19A5   
.............................................................CAGTGCATCACAGAACTTTGTCTC.............     25124_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                        24   
...........................................................GTCAGTGCATCACAGAACTTTGc................     15830_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                        22   
...........................................................GTCAGTGCATCACAGAACTTTGTa...............     38195_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                        23   
...........................................................GTCAGTGCATCACAGAACaTTGg................     36549_1_0_0_0_0_0       MATURE            1         0.53            1         1.22            0         0.00                      18A3   
..........................................................AGTCAGTGCATCACAGAACcTTGTt...............     24615_0_0_0_0_0_1       MATURE            1         0.53            0         0.00            1         0.93                      19C4   
                                                                                                                                        ----------                ----------                ----------   
                                                                                                                                               190                        82                       108                                          
                                                                                                                                                                     (43.16)                   (56.84)                                       




*** OTHER ***
_________________________________________________________________________________________________
CAGGCACCCTTAGCATTTGAGGTGAAGTTCTGTTATACACTCAGGCTGTGGCTCTGAAAGTCAGTGCATCACAGAACTTTGTCTCGAAAGCTTTCTA REF                  15                   103115556 - 103115652 
                                                            TCAGTGCATCACAGAACTTTGT                MATURE               15                   103115617 - 103115734 mmu-miR-148b         +                    
_________________________________________________________________________________________________

                                                                                             -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.......................GAAGTTCTGTTATACACTCAaGCTt..................................................   17196_1_0_0_0_0_1        OTHER            2        12.50            1        20.00            1         9.09                      20A3   
.......................GAAGTTCTGTTATACACTCAGaCT...................................................   28168_1_0_0_0_0_1        OTHER            2        12.50            1        20.00            1         9.09                      21A2   
.......................GAAGTTCTGTTATACACTCAGa.....................................................   25005_0_0_0_0_0_2        OTHER            2        12.50            0         0.00            2        18.18                        21   
.......................GAAGTTCTGTTATACACTCAGGC....................................................   38327_1_0_0_0_0_0        OTHER            1         6.25            1        20.00            0         0.00                        23   
.....................GTGAAGTTCTGTTATACACTCAt......................................................   15520_0_0_0_0_0_1        OTHER            1         6.25            0         0.00            1         9.09                        22   
.......................GAAGTTCTGTTATACACTCAGcCTt..................................................   40640_0_0_0_0_0_1        OTHER            1         6.25            0         0.00            1         9.09                      21C2   
.......................GAAGTTCTGTTATACACTCAcGCT...................................................   31212_0_0_0_0_0_1        OTHER            1         6.25            0         0.00            1         9.09                      20C3   
.......................GAAGTTCTGTTATACACTCAGGCTt..................................................   22977_0_0_0_0_0_1        OTHER            1         6.25            0         0.00            1         9.09                        24   
.......................GAAGTTCTGTTATACACTtAGGCa...................................................   18582_0_0_0_0_0_1        OTHER            1         6.25            0         0.00            1         9.09                      18T4   
........................AAGTTCTGTTATACACTCAGGCTt..................................................    9453_1_0_0_0_0_0        OTHER            1         6.25            1        20.00            0         0.00                        23   
.......................GAAGTTCTGTTATACACTtAGGCT...................................................     893_0_0_0_0_0_1        OTHER            1         6.25            0         0.00            1         9.09                      18T5   
.......................GAAGTTCTGTTATACACTgAGGCT...................................................    7727_0_0_0_0_0_1        OTHER            1         6.25            0         0.00            1         9.09                      18G5   
.......................GAAGTTCTGTTATACACTCAGGCa...................................................   28304_1_0_0_0_0_0        OTHER            1         6.25            1        20.00            0         0.00                        23   
                                                                                                                                      ----------                ----------                ----------   
                                                                                                                                              16                         5                        11                                          
                                                                                                                                                                   (31.25)                   (68.75)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE              82             108             190          92.23%
          OTHER               5              11              16           7.77%
                     ----------      ----------      ----------                
                             87             119             206                



[END]
