[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************
ID : mmu-mir-148b
DESCRIPTION : mmu-mir-148b MI0000617 Mus musculus miR-148b stem-loop
CHROMOSOME : 15
SPAN : 103115556 - 103115652
LENGTH : 97
SEQUENCE : CAGGCACCCTTAGCATTTGAGGTGAAGTTCTGTTATACACTCAGGCTGTGGCTCTGAAAGTCAGTGCATCACAGAACTTTGTCTCGAAAGCTTTCTA
OVERHANG THRESHOLD : 40%
**********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-148b
ACCID : MI0000617
PARENT : mmu-mir-148b
CHROMOSOME : 15
START : 103115556
STOP : 103115652
OFFSET : 61..82
SEQUENCE : TCAGTGCATCACAGAACTTTGT
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________________
CAGGCACCCTTAGCATTTGAGGTGAAGTTCTGTTATACACTCAGGCTGTGGCTCTGAAAGTCAGTGCATCACAGAACTTTGTCTCGAAAGCTTTCTA REF 15 103115556 - 103115652
TCAGTGCATCACAGAACTTTGT MATURE 15 103115617 - 103115734 mmu-miR-148b +
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................................................GTCAGTGCATCACAGAACTTTGT................ 38756_19_0_0_0_0_25 MATURE 44 23.16 19 23.17 25 23.15 23
........................................................AAtGTCAGTGCATCACAGAACTTTG................. 24083_3_0_0_0_0_26 MATURE 29 15.26 3 3.66 26 24.07 2T22
...........................................................GTCAGTGCATCACAGAACTTTGTt............... 28262_10_0_0_0_0_7 MATURE 17 8.95 10 12.20 7 6.48 23
..........................................................AGTCAGTGCATCACAGAACTTTGT................ 40731_8_0_0_0_0_7 MATURE 15 7.89 8 9.76 7 6.48 24
.......................................................GAAtGTCAGTGCATCACAGAACTTT.................. 22378_2_0_0_0_0_9 MATURE 11 5.79 2 2.44 9 8.33 3T21
..........................................................AGTCAGTGCATCACAGAACTTTGTt............... 13129_6_0_0_0_0_4 MATURE 10 5.26 6 7.32 4 3.70 24
...........................................................GTCAGTGCATCACAGAACaTTGT................ 6539_3_0_0_0_0_2 MATURE 5 2.63 3 3.66 2 1.85 18A4
...........................................................GTCAGTGCATCACAGAACgTTGT................ 7025_2_0_0_0_0_2 MATURE 4 2.11 2 2.44 2 1.85 18G4
...........................................................GTCAGTGCATCACAGAACTTcGTt............... 18405_0_0_0_0_0_3 MATURE 3 1.58 0 0.00 3 2.78 20C2
...........................................................GTCAGTGCATCACAGAACTTaGT................ 15234_2_0_0_0_0_1 MATURE 3 1.58 2 2.44 1 0.93 20A2
...........................................................GTCAGTGCATCACAGAAgTTTGT................ 28458_1_0_0_0_0_2 MATURE 3 1.58 1 1.22 2 1.85 17G5
..........................................................AGTCAGTGCATCACAGAACTcTGT................ 21740_3_0_0_0_0_0 MATURE 3 1.58 3 3.66 0 0.00 20C3
...........................................................GTCAGTGCATCACAGAACTTTGTCT.............. 10260_1_0_0_0_0_2 MATURE 3 1.58 1 1.22 2 1.85 25
...........................................................GTCAGTGCATCACAGAACaTTGTt............... 692_0_0_0_0_0_3 MATURE 3 1.58 0 0.00 3 2.78 18A4
...........................................................GTCAGTGCATCACAGAAaTTTGT................ 40918_2_0_0_0_0_0 MATURE 2 1.05 2 2.44 0 0.00 17A5
...........................................................GTCAGTGCATCACAGAACgTTGTt............... 7204_2_0_0_0_0_0 MATURE 2 1.05 2 2.44 0 0.00 18G4
...........................................................GTCAGTGCATCACAGAACTaTGT................ 39721_1_0_0_0_0_1 MATURE 2 1.05 1 1.22 1 0.93 19A3
..........................................................AGTCAGTGCATCACAGAACcTTGT................ 7567_2_0_0_0_0_0 MATURE 2 1.05 2 2.44 0 0.00 19C4
..........................................................AGTCAGTGCATCACAGAACTTaGT................ 40130_0_0_0_0_0_2 MATURE 2 1.05 0 0.00 2 1.85 21A2
..............................................................AGTGCATCACAGAACTTTGT................ 39191_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 20
...........................................................GTCAGTGCATCACAGAACcTTGTC............... 8178_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 18C5
.......................................................GAAtGTCAGTGCATCACAGAACTT................... 10217_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 3T20
.............................................................CAGTGCATCACAGAACTTTGTaTC............. 20298_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 21A2
.......................................................GAAtGTCAGTGCATCACAGAAC..................... 9621_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 3T18
...........................................................GTCAGTGtATCACAGAACTTTGTt............... 12617_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 7T15
...........................................................GTCAGTGCATCACAGAACTaTGTt............... 22420_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 19A3
...........................................................GTCAGTGCATCACAGAACTTTGa................ 18655_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 22
...........................................................GTCAGTGCATCACAGAAtTTTGT................ 382_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 17T5
...........................................................GTCAGTGCATCACAGAACTTcGT................ 21027_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 20C2
..........................................................AGTCAGTGCATCACAGAACTcTGTt............... 22311_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 20C3
..........................................................AGTCAGTGCATCACAGAAgTTTGT................ 1906_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 18G5
...........................................................GTCAGTGCATCACAGAACTTTGTCa.............. 17916_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 24
...........................................................GTCAGTGCATCACAGAACTgTGT................ 36835_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 19G3
..........................................................AGTCAGTGCATCACAGAACTaTGT................ 21485_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 20A3
...........................................................GTCAGTGCATCACAGAACTTTGaCT.............. 35258_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 22A2
..........................................................AGTCAGTGCATCACAGAACTTTGTa............... 34759_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 24
.......................................................GAAtGTCAGTGCATCACAGAACTTa.................. 7398_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 3T20
..........................................................AGTCAGTGCATCACAGAACaTTGT................ 33273_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 19A4
...........................................................GTCAGTGCATCACAGAACTTTGTC............... 24858_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 24
...........................................................GTCAGTGCATCACAGAACTTaGTt............... 19687_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 20A2
...........................................................GTCAGTGCATCACAGAACTaTGTCT.............. 22254_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 19A5
.............................................................CAGTGCATCACAGAACTTTGTCTC............. 25124_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 24
...........................................................GTCAGTGCATCACAGAACTTTGc................ 15830_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 22
...........................................................GTCAGTGCATCACAGAACTTTGTa............... 38195_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 23
...........................................................GTCAGTGCATCACAGAACaTTGg................ 36549_1_0_0_0_0_0 MATURE 1 0.53 1 1.22 0 0.00 18A3
..........................................................AGTCAGTGCATCACAGAACcTTGTt............... 24615_0_0_0_0_0_1 MATURE 1 0.53 0 0.00 1 0.93 19C4
---------- ---------- ----------
190 82 108
(43.16) (56.84)
*** OTHER ***
_________________________________________________________________________________________________
CAGGCACCCTTAGCATTTGAGGTGAAGTTCTGTTATACACTCAGGCTGTGGCTCTGAAAGTCAGTGCATCACAGAACTTTGTCTCGAAAGCTTTCTA REF 15 103115556 - 103115652
TCAGTGCATCACAGAACTTTGT MATURE 15 103115617 - 103115734 mmu-miR-148b +
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................GAAGTTCTGTTATACACTCAaGCTt.................................................. 17196_1_0_0_0_0_1 OTHER 2 12.50 1 20.00 1 9.09 20A3
.......................GAAGTTCTGTTATACACTCAGaCT................................................... 28168_1_0_0_0_0_1 OTHER 2 12.50 1 20.00 1 9.09 21A2
.......................GAAGTTCTGTTATACACTCAGa..................................................... 25005_0_0_0_0_0_2 OTHER 2 12.50 0 0.00 2 18.18 21
.......................GAAGTTCTGTTATACACTCAGGC.................................................... 38327_1_0_0_0_0_0 OTHER 1 6.25 1 20.00 0 0.00 23
.....................GTGAAGTTCTGTTATACACTCAt...................................................... 15520_0_0_0_0_0_1 OTHER 1 6.25 0 0.00 1 9.09 22
.......................GAAGTTCTGTTATACACTCAGcCTt.................................................. 40640_0_0_0_0_0_1 OTHER 1 6.25 0 0.00 1 9.09 21C2
.......................GAAGTTCTGTTATACACTCAcGCT................................................... 31212_0_0_0_0_0_1 OTHER 1 6.25 0 0.00 1 9.09 20C3
.......................GAAGTTCTGTTATACACTCAGGCTt.................................................. 22977_0_0_0_0_0_1 OTHER 1 6.25 0 0.00 1 9.09 24
.......................GAAGTTCTGTTATACACTtAGGCa................................................... 18582_0_0_0_0_0_1 OTHER 1 6.25 0 0.00 1 9.09 18T4
........................AAGTTCTGTTATACACTCAGGCTt.................................................. 9453_1_0_0_0_0_0 OTHER 1 6.25 1 20.00 0 0.00 23
.......................GAAGTTCTGTTATACACTtAGGCT................................................... 893_0_0_0_0_0_1 OTHER 1 6.25 0 0.00 1 9.09 18T5
.......................GAAGTTCTGTTATACACTgAGGCT................................................... 7727_0_0_0_0_0_1 OTHER 1 6.25 0 0.00 1 9.09 18G5
.......................GAAGTTCTGTTATACACTCAGGCa................................................... 28304_1_0_0_0_0_0 OTHER 1 6.25 1 20.00 0 0.00 23
---------- ---------- ----------
16 5 11
(31.25) (68.75)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 82 108 190 92.23%
OTHER 5 11 16 7.77%
---------- ---------- ----------
87 119 206
[END]