[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-147
DESCRIPTION : mmu-mir-147 MI0005482 Mus musculus miR-147 stem-loop
CHROMOSOME : 2
SPAN : 122466539 - 122466617
LENGTH : 79
SEQUENCE : TATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-147
ACCID : MI0005482
PARENT : mmu-mir-147
CHROMOSOME : 2
START : 122466539
STOP : 122466617
OFFSET : 48..69
SEQUENCE : GTGTGCGGAAATGCTTCTGCTA
STRAND : +
******************************
*** MATURE ***
_______________________________________________________________________________
TATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGG REF 2 122466539 - 122466617
GTGTGCGGAAATGCTTCTGCTA MATURE 2 122466587 - 122466686 mmu-miR-147 +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................GTGTGCGGAAATGCTTCaGCTAC.......... 25665_0_0_0_0_0_2 MATURE 2 13.33 0 0.00 2 22.22 17A5
...............................................GTGTGCGGAAATGCTTCTGCTAt.......... 27690_1_0_0_0_0_1 MATURE 2 13.33 1 16.67 1 11.11 22
...............................................GTGTGCGGAAATGCTTCcGCTAt.......... 22159_0_0_0_0_0_1 MATURE 1 6.67 0 0.00 1 11.11 17C4
...............................................GTGTGCGGAAATGCTTCTGCTAtAT........ 9318_0_0_0_0_0_1 MATURE 1 6.67 0 0.00 1 11.11 22T2
...............................................GTGTGCGGAAATGCTTCTGCTA........... 6810_0_0_0_0_0_1 MATURE 1 6.67 0 0.00 1 11.11 22
...............................................GTGTGCGGAAATGCTTCTaCTA........... 21020_1_0_0_0_0_0 MATURE 1 6.67 1 16.67 0 0.00 18A3
...............................................GTGTGCGGAAATGCTTCTGCT............ 43691_1_0_0_0_0_0 MATURE 1 6.67 1 16.67 0 0.00 21
...............................................GTGTGCGGAAATGCTTCTGaTAt.......... 38925_0_0_0_0_0_1 MATURE 1 6.67 0 0.00 1 11.11 19A2
...............................................GTGTGCGGAAATGCTTCTaCTAt.......... 12711_1_0_0_0_0_0 MATURE 1 6.67 1 16.67 0 0.00 18A3
...............................................GTGTGCGGAAATGCTTCTtCT............ 17090_1_0_0_0_0_0 MATURE 1 6.67 1 16.67 0 0.00 18T2
...............................................GTGTGCGGAAATGCTTCTGCTACAT........ 3553_0_0_0_0_0_1 MATURE 1 6.67 0 0.00 1 11.11 25
...............................................GTGTGCGGAAATGCTTCTGCTt........... 30515_1_0_0_0_0_0 MATURE 1 6.67 1 16.67 0 0.00 21
...............................................GTGTGCGGAAATGCTTCTGCTACt......... 1661_0_0_0_0_0_1 MATURE 1 6.67 0 0.00 1 11.11 23
---------- ---------- ----------
15 6 9
(40.00) (60.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 6 9 15 100.00%
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6 9 15
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