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REFERENCE HAIRPIN
***************************************************************************************
ID                 : mmu-mir-144
DESCRIPTION        : mmu-mir-144 MI0000168 Mus musculus miR-144 stem-loop
CHROMOSOME         : 11
SPAN               : 77886507 - 77886572
LENGTH             : 66
SEQUENCE           : GGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTC
OVERHANG THRESHOLD : 40%
***************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-144
ACCID      : MI0000168
PARENT     : mmu-mir-144
CHROMOSOME : 11
START      : 77886507
STOP       : 77886572
OFFSET     : 43..62
SEQUENCE   : TACAGTATAGATGATGTACT
STRAND     : +
******************************



*** MATURE ***
__________________________________________________________________
GGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTC REF                  11                   77886507 - 77886572  
                                          TACAGTATAGATGATGTACT     MATURE               11                   77886550 - 77886634  mmu-miR-144          +                    
__________________________________________________________________

                                                              -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..........................................TACAGTATAGATGATGTACTA....   29739_6_0_0_0_0_0       MATURE            6        54.55            6        54.55            0            0                        21   
..........................................TACAGTATAGATGATGaACTA....   10804_2_0_0_0_0_0       MATURE            2        18.18            2        18.18            0            0                      16A4   
..........................................TACAGTATAGATGATGTtCTA....   39828_1_0_0_0_0_0       MATURE            1         9.09            1         9.09            0            0                      17T3   
.........................................CTACAGTATAGATGATGTACT.....   14840_1_0_0_0_0_0       MATURE            1         9.09            1         9.09            0            0                        21   
..........................................TACAGTATAGATGATGTAtTA....   13113_1_0_0_0_0_0       MATURE            1         9.09            1         9.09            0            0                      18T2   
                                                                                                       ----------                ----------                ----------   
                                                                                                               11                        11                         0                                          
                                                                                                                                   (100.00)                    (0.00)                                       




*** OTHER ***
__________________________________________________________________
GGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTC REF                  11                   77886507 - 77886572  
                                          TACAGTATAGATGATGTACT     MATURE               11                   77886550 - 77886634  mmu-miR-144          +                    
__________________________________________________________________

                                                              -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
....GGGATATCATCATATACTGTAAGT.......................................   36537_2_0_0_0_0_0        OTHER            2        50.00            2        50.00            0            0                        24   
....GGGATATCATCATATACTaTA..........................................   19854_1_0_0_0_0_0        OTHER            1        25.00            1        25.00            0            0                      18A2   
....GGGATATCATCATATACTGgAAGT.......................................   27764_1_0_0_0_0_0        OTHER            1        25.00            1        25.00            0            0                      19G4   
                                                                                                       ----------                ----------                ----------   
                                                                                                                4                         4                         0                                          
                                                                                                                                   (100.00)                    (0.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE              11               0              11          73.33%
          OTHER               4               0               4          26.67%
                     ----------      ----------      ----------                
                             15               0              15                



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