[BEGIN]
REFERENCE HAIRPIN
***************************************************************************************
ID : mmu-mir-144
DESCRIPTION : mmu-mir-144 MI0000168 Mus musculus miR-144 stem-loop
CHROMOSOME : 11
SPAN : 77886507 - 77886572
LENGTH : 66
SEQUENCE : GGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTC
OVERHANG THRESHOLD : 40%
***************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-144
ACCID : MI0000168
PARENT : mmu-mir-144
CHROMOSOME : 11
START : 77886507
STOP : 77886572
OFFSET : 43..62
SEQUENCE : TACAGTATAGATGATGTACT
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________
GGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTC REF 11 77886507 - 77886572
TACAGTATAGATGATGTACT MATURE 11 77886550 - 77886634 mmu-miR-144 +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................TACAGTATAGATGATGTACTA.... 29739_6_0_0_0_0_0 MATURE 6 54.55 6 54.55 0 0 21
..........................................TACAGTATAGATGATGaACTA.... 10804_2_0_0_0_0_0 MATURE 2 18.18 2 18.18 0 0 16A4
..........................................TACAGTATAGATGATGTtCTA.... 39828_1_0_0_0_0_0 MATURE 1 9.09 1 9.09 0 0 17T3
.........................................CTACAGTATAGATGATGTACT..... 14840_1_0_0_0_0_0 MATURE 1 9.09 1 9.09 0 0 21
..........................................TACAGTATAGATGATGTAtTA.... 13113_1_0_0_0_0_0 MATURE 1 9.09 1 9.09 0 0 18T2
---------- ---------- ----------
11 11 0
(100.00) (0.00)
*** OTHER ***
__________________________________________________________________
GGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTC REF 11 77886507 - 77886572
TACAGTATAGATGATGTACT MATURE 11 77886550 - 77886634 mmu-miR-144 +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....GGGATATCATCATATACTGTAAGT....................................... 36537_2_0_0_0_0_0 OTHER 2 50.00 2 50.00 0 0 24
....GGGATATCATCATATACTaTA.......................................... 19854_1_0_0_0_0_0 OTHER 1 25.00 1 25.00 0 0 18A2
....GGGATATCATCATATACTGgAAGT....................................... 27764_1_0_0_0_0_0 OTHER 1 25.00 1 25.00 0 0 19G4
---------- ---------- ----------
4 4 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 11 0 11 73.33%
OTHER 4 0 4 26.67%
---------- ---------- ----------
15 0 15
[END]