[BEGIN]
REFERENCE HAIRPIN
************************************************************************************************************************
ID : mmu-mir-138-1
DESCRIPTION : mmu-mir-138-1 MI0000722 Mus musculus miR-138-1 stem-loop
CHROMOSOME : 9
SPAN : 122591994 - 122592092
LENGTH : 99
SEQUENCE : CTCTAGCATGGTGTTGTGGGACAGCTGGTGTTGTGAATCAGGCCGTTGCCAATCAGAGAACGGCTACTTCACAACACCAGGGCCACACTGCACTGCAAG
OVERHANG THRESHOLD : 40%
************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-138
ACCID : MI0000722
PARENT : mmu-mir-138-1
CHROMOSOME : 9
START : 122591994
STOP : 122592092
OFFSET : 23..45
SEQUENCE : AGCTGGTGTTGTGAATCAGGCCG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-138*
ACCID : MI0000722
PARENT : mmu-mir-138-1
CHROMOSOME : 9
START : 122591994
STOP : 122592092
OFFSET : 61..82
SEQUENCE : CGGCTACTTCACAACACCAGGG
STRAND : +
******************************
*** MATURE ***
___________________________________________________________________________________________________
CTCTAGCATGGTGTTGTGGGACAGCTGGTGTTGTGAATCAGGCCGTTGCCAATCAGAGAACGGCTACTTCACAACACCAGGGCCACACTGCACTGCAAG REF 9 122591994 - 122592092
AGCTGGTGTTGTGAATCAGGCCG MATURE 9 122592017 - 122592137 mmu-miR-138 +
CGGCTACTTCACAACACCAGGG MATURESTAR 9 122592055 - 122592174 mmu-miR-138* +
___________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......................AGCTGGTGTTGTGAATCAaGCCG....................................................... 35350_4_0_0_0_0_2 MATURE 6 15.79 4 21.05 2 10.53 18A4
......................AGCTGGTGTTGTGAATCAaGCCGT...................................................... 32442_2_0_0_0_0_2 MATURE 4 10.53 2 10.53 2 10.53 18A5
......................AGCTGGTGTTGTGAATCAGtCCGT...................................................... 2264_2_0_0_0_0_1 MATURE 3 7.89 2 10.53 1 5.26 19T4
......................AGCTGGTGTTGTGAATCAtGCCG....................................................... 20288_2_0_0_0_0_1 MATURE 3 7.89 2 10.53 1 5.26 18T4
.......................GCTGGTGTTGTGAATCAGGCCGTTt.................................................... 389_2_0_0_0_0_1 MATURE 3 7.89 2 10.53 1 5.26 24
......................AGCTGGTGTTGTGAATCAtGCCGT...................................................... 37676_0_0_0_0_0_2 MATURE 2 5.26 0 0.00 2 10.53 18T5
......................AGCTGGTGTTGTGAATCAGtCCG....................................................... 12379_0_0_0_0_0_2 MATURE 2 5.26 0 0.00 2 10.53 19T3
......................AGCTGGTGTTGTGAATCAGGCCaTT..................................................... 23252_2_0_0_0_0_0 MATURE 2 5.26 2 10.53 0 0.00 22A2
......................AGCTGGTGTTGTGAATCAGGCCGTT..................................................... 4073_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 25
......................AGCTGGTGTTGTGAATCAGaCCG....................................................... 37103_1_0_0_0_0_0 MATURE 1 2.63 1 5.26 0 0.00 19A3
......................AGCTGGTGTTGTGAATCAGaCCGTT..................................................... 24405_1_0_0_0_0_0 MATURE 1 2.63 1 5.26 0 0.00 19A5
......................AGCTGGTGTTGTGAATCAGtCCGTa..................................................... 23276_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 19T4
......................AGCTGGTGTTGTGAATCAGaCC........................................................ 24673_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 19A2
......................AGCTGGTGTTGTGAATCAGaCCGT...................................................... 11883_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 19A4
......................AGCTGGTGTTGTGAATCAGGCCGTa..................................................... 39621_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 24
.......................GCTGGTGTTGTGAATaAGGCC........................................................ 39716_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 15A5
......................AGCTGGTGTTGTGAATCAGaCCt....................................................... 16855_1_0_0_0_0_0 MATURE 1 2.63 1 5.26 0 0.00 19A2
......................AGCTGGTGTTGTGAATCAGG.......................................................... 33479_1_0_0_0_0_0 MATURE 1 2.63 1 5.26 0 0.00 20
......................AGCTGGTGTTGTGAATCAtGCCa....................................................... 19065_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 18T3
.......................GCTGGTGTTGTGAATCAGGCCaTTt.................................................... 44150_0_0_0_0_0_1 MATURE 1 2.63 0 0.00 1 5.26 21A2
......................AGCTGGTGTTGTGAATCAGaCCGTa..................................................... 31455_1_0_0_0_0_0 MATURE 1 2.63 1 5.26 0 0.00 19A4
---------- ---------- ----------
38 19 19
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 19 19 38 100.00%
---------- ---------- ----------
19 19 38
[END]